May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [C:0186] and [P:0215]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 0.1 0 0.3 0.6 -0.4 -0.9 -0.3 -0.3 0.4 -0.5 -0.1 0.3 0.3 0.9 0 0.8 -1 0.1 0.6
F 0.6 -0.3 0.2 -0.1 0.1 -0.2 -0.2 -0.3 -0.1 -0.1 -0.1 0.1 0.1 -0.2 -0.1 -0.2 -0.4 0.8 0 -0.3
I -0.1 0.1 -0.2 0.4 -0.6 -0.1 0.7 0.2 -0.1 -0.2 0 0.1 -0.2 0.3 -0.4 -0.5 -0.1 0.8 0.3 -0.6
L 0.5 0.2 -0.8 -0.1 -0.4 -0.1 -0.5 -0.2 -0.3 0.2 0 0.3 -0.2 -0.5 -0.1 0.9 0.3 1.1 0.1 -0.2
V 0.2 -0.3 0.5 0.7 -0.5 0.3 0.4 0.3 -0.3 -0.1 -0.1 0.4 -0.6 -0.1 0 0.5 0.4 -0.6 0.3 -0.4
M 0 0 -0.6 -0.5 -0.3 1.6 -0.3 0.3 -0.1 -0.1 -0.1 0.3 0.1 0.2 0.1 -0.5 0.3 -0.2 0 -0.4
W -0.8 -0.4 1.6 0 1.4 -0.2 -0.2 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.1 -0.1 -0.3 -0.3 -0.4 0.1 -0.3
Y 0.2 0.1 0.4 -0.4 0.2 -0.3 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.3 -0.1 0.4 -0.1 -0.2
D -0.1 1.1 -0.1 0 -0.3 -0.3 -0.2 -0.2 -0.1 -0.1 -0.1 0.1 0.4 -0.2 -0.1 -0.3 0 0.3 0.1 0
E 0.2 0.5 0.3 0.1 -0.5 -0.2 -0.1 0.1 -0.1 0 0 -0.1 -0.1 0.1 -0.1 -0.2 -0.1 -0.2 -0.3 0.1
K -0.1 0.2 -0.4 -0.1 -0.6 -0.2 -0.1 0.4 0.2 0.2 0 -0.1 -0.1 0.2 -0.1 0.4 -0.2 -0.2 0.1 -0.2
R -0.4 -0.2 -0.2 0.3 0.2 -0.2 0 -0.2 -0.1 -0.1 0.4 0.1 0.1 0.4 -0.1 0 -0.1 0.1 -0.1 -0.3
H -0.1 -0.1 -0.6 -0.2 -0.2 0 -0.1 0.1 -0.1 0 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.3 1.3 -0.4 0.5
N -0.6 -0.7 -0.5 0.6 0 -0.2 2.3 0.1 0.3 -0.1 -0.1 -0.2 -0.2 -0.1 -0.7 -0.2 -0.7 0.4 1 -0.4
Q 0.9 1.1 -0.1 -0.7 0.1 0.1 -0.3 -0.3 0 0.1 -0.1 0.2 -0.2 -0.1 -0.4 0.5 -0.1 -0.4 -0.6 -0.3
S 0 -0.2 -0.1 -0.3 0.3 0.2 -0.4 -0.6 0.1 0.2 0 -0.1 0.6 -0.1 0.8 0.6 0.6 -0.6 -0.3 0.5
T 0 -0.4 -0.2 0.3 -0.3 0.8 0 -0.1 0.2 -0.6 -0.1 -0.3 -0.1 0.7 0.1 0.4 0.2 0.1 -0.6 1
G 0.1 -0.8 1.5 0.6 1.8 -0.2 -0.7 -0.6 0 -0.1 0.2 -0.4 0 -0.7 -0.7 -0.1 0.7 -0.8 0.1 0
P 0 0.1 0.4 0.2 -0.2 -0.2 -0.2 0.1 -0.1 0 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 0.1 -0.2 0.1 -0.3
C 0.2 0.4 0.1 -0.1 0.4 -0.1 0.6 0.8 0.4 -0.3 -0.5 -0.6 -0.3 0 0.2 -0.5 -0.4 -0.2 0.1 0.8

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0186 1.6 -0.5 0.3 0.6 0.9 -0.4 -1.2 -0.7 -0.5 -0.9 -0.8 0 -0.7 -0.3 -0.9 1.3 1.3 0.3 -0.9 0.8
0215 0.8 0.4 1.9 1.4 1.7 0.2 -0.8 0.1 -0.8 -1.1 -0.9 -0.4 -1.4 -0.4 -1.6 0.3 0.3 0.2 0.6 -0.1
Select residue pair below:
i_j Score Prob
0186_0215 1.620 1.00
0211_0215 0.825 0.78
0215_0230 0.764 0.71
Local Interactions:
i_j Score Prob
0214_0215 0.695 0.60
0213_0215 0.536 0.33
0215_0216 0.533 0.33
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.0171 seconds.