OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [F:0183] and [T:0197]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	0.1	0.9	1.1	0.9	0.2	-0.2	1.4	-0.8	-0.5	-0.4	-0.8	-0.6	0.2	-0.5	-0.4	0.9	-0.1	-0.2	0.4
F	0.1	0.1	-0.1	-0.1	-0.3	0.1	0.1	0.5	0	0.1	0.5	0.8	0.3	-0.1	0.3	0.3	-0.1	0.5	-1	-0.4
I	0.8	0	0.5	0	0.2	-0.4	-0.2	0.2	-0.7	-0.3	0.4	0.3	-0.1	-0.3	0.2	0.6	0.2	-0.7	0.4	0
L	0.2	0.1	0.4	0.5	0.5	0.1	0.3	0.1	-0.6	-0.2	0.4	0.5	-0.1	-0.7	0.1	0.1	0.3	0	0.2	-0.2
V	0.4	0.6	0.6	0.5	0.6	0	0.2	0.3	-0.5	-0.5	0.2	0.3	-0.1	-0.6	-0.7	0.3	0.2	-0.4	0.3	-0.1
M	0	1.1	0.2	0.1	0	0.4	0.4	-0.1	-0.1	-0.1	-0.5	0	-0.1	-0.6	-0.3	-0.5	0.2	-0.2	0	0.2
W	0.6	-0.4	-0.9	-1	0.4	-0.4	0	-0.1	-0.2	-0.2	-0.2	-0.3	0.1	0.2	-0.1	0.4	1	0.3	1	-0.4
Y	0	-1.2	-0.8	-1.4	-1.1	-0.4	-0.6	-1.1	0.8	1.4	0.6	0.1	-0.1	0.5	0.4	0.7	-0.4	1.5	-0.5	1.5
D	-0.2	-0.1	-0.3	0.2	0.1	0.1	0	-0.1	0.2	0.2	-0.1	-0.1	0	0	0.2	-0.1	-0.3	-0.1	-0.2	0
E	-0.2	0.1	-0.3	-0.1	-0.1	-0.2	0	-0.1	-0.1	-0.1	0.2	-0.1	0.2	0	0	-0.1	-0.3	0.4	0.2	-0.1
K	-0.2	-0.1	0	-0.1	-0.1	0.1	0	-0.1	0.2	0	0	-0.1	0	0	0	-0.1	0.3	-0.1	-0.1	-0.1
R	0.1	-0.1	-0.3	-0.1	-0.4	-0.2	0	-0.1	0.3	0	-0.1	-0.1	0	-0.1	0.2	0.3	-0.1	-0.1	0.1	0.2
H	0.2	-0.1	-0.1	0.2	-0.1	-0.2	0.2	-0.1	-0.1	-0.1	-0.1	-0.1	0	0	0	0.1	-0.3	-0.1	-0.1	0
N	0	-0.2	0.3	0.4	0.1	-0.2	0	-0.1	0.2	-0.1	-0.1	-0.1	0	-0.1	0	-0.2	-0.4	-0.1	-0.2	-0.1
Q	0	-0.2	-0.3	-0.4	-0.3	0.1	0	-0.1	0.5	0	0.1	0.1	0	-0.1	0.2	-0.1	0	0.1	0.1	-0.1
S	-0.1	-0.1	-0.3	0	0	-0.2	0.1	-0.2	0.1	0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	0.9	-0.2	0.2	-0.1
T	-0.7	1.4	-0.1	-0.4	-0.6	-0.7	-0.2	-0.4	-0.2	0	0	0	-0.1	2.7	-0.2	-0.6	-0.3	-0.1	-0.2	-0.2
G	-0.2	0.1	-0.3	1.1	0	2.3	-0.1	-0.2	0.1	0.1	-0.2	-0.3	-0.1	-0.2	-0.1	-0.5	-0.7	-0.4	-0.5	-0.1
P	0.3	-0.3	0.1	-0.1	0.7	0.1	-0.1	-0.2	0.3	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0	-0.2	-0.2	-0.3	-0.1
C	-0.7	0.4	1.3	0.6	0.8	-0.1	-0.1	0.3	-0.2	-0.1	-0.4	-0.7	0.4	-0.4	-0.3	-0.1	-0.2	0.4	-0.2	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0183	1	1.8	2.3	2.8	2.2	0.7	-0.8	0.7	-1.2	-1.1	-1.2	-1	-1.1	-1.1	-1	-0.8	-0.3	-1.1	-0.6	0
0197	0.7	0.4	1.1	1.9	1	0.6	-1.1	-0.2	-0.3	-1	-0.6	-0.4	-1	-0.5	-0.7	0.2	0.9	-0.3	0.5	-0.8

Select residue pair below:

i_j	Score	Prob
0141_0183	2.050	1.00
0183_0197	1.045	0.94
0175_0183	0.950	0.90
0149_0183	0.831	0.79
0173_0183	0.697	0.60

Local Interactions:

i_j

Score

Prob

See all coupling residues
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