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Coupling matrix for [L:0108] and [N:0111]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0.1 -0.2 0.2 0 0 0 -0.3 -0.6 -0.3 -0.3 0.1 0.3 -0.1 0 0.2 0.3 0.7 0.4 0.2
F 0.1 -0.2 0.1 -0.2 0.6 0 -0.8 0.1 0.3 0.3 0.1 -0.4 -0.3 0.5 -0.2 0.3 0.4 -0.6 0.8 0
I 0.1 -0.3 -0.3 -0.2 -0.3 -0.4 -1 -0.6 0.5 0 0.8 0.5 -0.1 0.5 0.6 0.4 -0.2 0.1 0.1 0
L 0.1 0.1 -0.5 0.4 -0.1 -0.1 -0.8 -0.4 0.2 0 0.5 0.2 -0.1 0.3 0.2 0.3 0 -0.1 0.3 0
V 0 -0.5 -0.4 0 -0.4 -0.1 -0.4 -0.1 0.3 -0.1 0.4 0.6 0.2 -0.4 0.4 0.1 0 0.4 0.5 0
M -0.3 0.3 -0.3 0.1 0.3 -0.4 -0.8 -0.1 0.4 -0.1 0.1 0.1 -0.3 -0.4 -0.1 0 0.5 0.3 0 0.6
W -0.3 -0.4 1 0.3 0.1 -0.4 -0.8 -0.5 0.5 2 0.1 0 -0.6 0.2 0.9 -0.7 -0.3 -0.2 -0.8 -0.3
Y -0.1 0.1 -0.5 0.4 0 1.3 -0.8 -0.3 -0.1 -0.1 0.7 0.7 0.4 -0.1 -0.4 0 0 -1 0.7 0.5
D -0.2 -0.1 0.4 0.5 0 -0.1 0.4 -0.3 -0.1 0.2 -0.3 -0.2 0.2 0 -0.5 -0.3 0.2 -0.4 0.1 0.1
E 0.6 -0.6 0.1 -0.3 -0.3 0.1 -0.4 -0.1 -0.5 -0.3 -0.6 -0.3 0.2 0.1 0.2 0.3 0.1 0 0.5 0.2
K 0.2 -0.2 0.4 -0.5 0.5 -0.3 0 0 0.1 -0.5 0.4 -0.4 -0.3 0.5 -0.6 -0.2 0.1 0 0.2 0
R -0.1 1 -0.6 -0.6 0 -0.3 1.2 0.8 0 0.2 -0.3 -0.2 0.3 0.6 0 -0.3 -0.6 0.1 -0.8 -0.5
H 0 -0.4 -0.2 -0.3 -0.4 -0.1 0 0.2 -0.3 0 0.3 0.1 -0.1 0.1 -0.1 0.7 -0.2 0.2 -0.1 -0.2
N 0.1 0.3 -0.1 -0.2 -0.2 -0.3 0.1 0 0.1 -0.3 -0.3 -0.2 1 0.4 0.6 0.1 -0.1 -0.2 -0.6 0.4
Q -0.1 -0.3 -0.2 -0.6 0.8 -0.1 0 -0.3 0.1 0.3 -0.1 0.1 0 0.3 -0.2 -0.1 0.4 0.2 -0.6 0.1
S -0.2 -0.2 -0.7 0.3 -0.2 0.4 1 0.3 -0.4 -0.1 -0.3 -0.2 0.4 0.2 0.1 0 0.1 0.3 -0.2 -0.1
T -0.2 0.2 -0.2 0.4 -0.4 0.4 1.4 0.3 0 0.1 0.2 0.1 -0.1 -0.5 -0.7 -0.3 0.1 0.2 -0.3 -0.2
G -0.3 1.8 1.5 0.9 0 -0.4 0.3 1.2 -0.7 -0.8 -0.9 -0.2 -0.3 -0.9 0.2 -0.6 -0.4 0.2 -0.3 -0.6
P 0.4 -0.9 0.8 0.2 0 0.4 -0.4 -0.4 0.2 -0.5 0.1 -0.1 -0.1 -0.1 -0.1 0.2 0.5 0.2 0.1 -0.4
C -0.2 0.1 -0.2 -0.1 -0.5 0.1 0.7 -0.2 0.5 0.8 -0.1 0.3 -0.3 -0.7 0.6 0.2 -0.6 -0.1 0.2 -0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0108 0.9 0.5 0.8 1.5 1 0.1 -1.1 0.1 -0.4 -0.4 -0.5 -0.2 -0.8 -0.1 -0.3 0.4 0.6 0.1 0.6 -0.6
0111 0.5 -0.8 -0.3 0.3 -0.1 -0.8 -1.4 -1.2 0.6 0.5 0.2 0.1 -0.4 0.7 0.2 0.7 0.2 1.7 0.2 -1
Select residue pair below:
i_j Score Prob
0088_0108 0.700 0.61
0108_0111 0.568 0.38
Local Interactions:
i_j Score Prob
0107_0108 0.788 0.74
0108_0109 0.636 0.50
0108_0110 0.534 0.33
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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