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Coupling matrix for [W:0088] and [L:0108]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.2 -0.1 0.2 0 -0.1 0.3 0 -0.3 0.2 0.1 0 -0.1 -0.3 -0.2 0 -0.2 -0.2 0.2 -0.2
F 0 0.3 0.2 0.3 0.5 0.3 0.7 0.1 -0.4 -0.6 0.3 0.3 -0.8 0 -0.2 0.2 0.4 -0.3 0 0
I -0.5 0.1 0.5 0.7 0.1 0.6 0.9 -0.2 -0.6 -0.8 0.3 0.1 -0.8 0 -0.1 -0.4 0.2 0.6 0.1 -0.2
L 0.1 0.9 0.5 0.7 0.6 0.2 0.3 -0.3 0.4 -0.8 -0.1 0.1 -0.4 -0.6 -0.4 -0.2 0.8 -0.5 0.1 -0.3
V 0.1 0.6 0.4 0.6 0.5 0.2 0.6 0.4 -0.9 -0.1 -0.3 0 -0.7 -0.7 -0.4 0 -0.2 0.3 -0.1 0.6
M 0.3 -0.1 0.1 0.4 0.6 0 0.1 0.3 0.1 -0.7 -0.4 -0.7 -0.4 -0.4 0.4 0 0 0.7 0 -0.2
W 0.4 -0.2 -0.2 0 0.3 -0.4 -1.1 -0.3 -0.1 -0.3 0.3 0.1 -0.2 0 0.4 0.5 0.2 -0.2 0.8 0
Y 0.2 -0.2 0.1 0 0.3 -0.3 -1.5 -0.5 0.4 0 -0.2 0.5 0 0.6 -0.6 0.5 0.9 -0.4 0.8 0.4
D -0.1 0.1 -0.2 0 -0.2 -0.1 -0.1 -0.1 0 -0.1 0.2 -0.1 0 0 0 -0.1 0 -0.1 -0.2 0.2
E -0.1 -0.2 -0.1 0.1 -0.7 0.3 -0.2 0.1 0.2 0 0.1 -0.1 0.1 0 -0.2 0.1 -0.3 1.4 -0.6 -0.1
K -0.1 -0.3 0.2 -0.5 -0.3 -0.1 0.3 0.1 0.6 -0.1 -0.2 -0.2 0.1 0.1 0.1 -0.1 -0.2 -0.3 0.4 0
R 0.4 -0.4 0.4 -0.6 0.5 -0.3 0.2 -0.5 0 -0.1 -0.1 0.1 0.1 0 -0.1 0.3 -0.3 -0.1 0.4 -0.1
H 0.1 -0.8 -0.7 -0.4 -0.7 -0.2 -0.5 0.3 -0.1 1.1 -0.4 0.5 1.3 0.1 0.5 0.3 0.1 -0.1 0.2 -0.5
N -0.3 -0.1 -0.3 -0.1 -0.2 1 -0.1 0 0.2 -0.2 -0.1 0 0.2 0.1 -0.1 0.1 -0.3 -0.1 -0.3 0.1
Q -0.2 0.6 -0.1 -0.5 -0.5 -0.2 -0.2 0.5 0.3 -0.1 -0.1 -0.2 0.6 -0.1 0.3 -0.5 -0.2 0.3 0.4 -0.2
S 0.1 -0.3 -0.1 0 -0.2 -0.3 -0.1 0.1 -0.2 1.2 0.7 -0.3 0.3 -0.1 0.2 -0.6 -0.1 -0.1 -0.4 -0.3
T -0.2 -0.2 0 0.1 -0.1 0 -0.2 0.7 -0.2 0.3 0.4 -0.2 0.5 0.1 -0.4 -0.3 -0.2 -0.5 -0.5 0.4
G 0.4 0 -0.1 -0.1 0.4 -0.4 0 -0.2 0 -0.2 -0.3 0.4 -0.1 0 0.3 0.3 -0.1 -0.4 0 0
P 0.3 -0.4 0.4 -0.2 -0.1 0.4 0.3 -0.2 0.1 1.2 -0.2 -0.3 -0.3 -0.4 0.2 0.1 -0.3 0.3 -0.3 -0.2
C -0.6 0.9 0.2 0 0.1 0.2 -0.3 -0.3 -0.4 -0.2 -0.4 -0.3 0.2 1.4 0.2 -0.2 -0.1 -0.2 -0.6 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0088 0.3 1.2 0.7 0.9 0.6 -0.2 0.6 0.9 -1.3 -0.5 -0.9 -0.4 -0.3 -0.9 -0.4 0 0.2 -0.2 0 0
0108 0.9 0.5 0.8 1.5 1 0.1 -1.1 0.1 -0.4 -0.4 -0.5 -0.2 -0.8 -0.1 -0.3 0.4 0.6 0.1 0.6 -0.6
Select residue pair below:
i_j Score Prob
0088_0108 0.700 0.61
0108_0111 0.568 0.38
Local Interactions:
i_j Score Prob
0107_0108 0.788 0.74
0108_0109 0.636 0.50
0108_0110 0.534 0.33
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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