OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [V:0096] and [S:0100]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	-0.4	0.4	0.2	-0.2	-0.2	-0.3	-0.1	0.3	0.2	0.3	-0.1	0	0.1	0	0.1	-0.1	0.4	0.1	-0.1
F	-0.2	-0.1	-0.3	-0.6	-0.4	0.4	-0.3	0.3	0	-0.2	0	0.6	-0.2	-0.1	0.1	0.7	0.4	0.2	0	0.3
I	0	0.5	0	-0.1	0.2	-0.5	-0.3	0	0.2	0.4	0.2	0	-0.1	0.4	-0.1	0.3	0.1	-0.1	-0.1	0.2
L	0.2	-0.2	0.2	-0.4	0.2	0.1	-0.3	-0.1	-0.2	0.5	0	0.8	-0.5	-0.2	0.4	0.3	-0.1	-0.1	0.1	-0.1
V	0.6	-0.4	-0.1	-0.2	0.2	0.3	-1	0	0.3	0.2	0.2	-0.2	0	0.3	-0.2	0.2	0.4	0.1	0	0.1
M	0.5	-0.1	-0.1	0.1	-0.2	0.1	0.1	-0.2	-0.2	-0.6	0.1	0.7	0	0.3	0.3	0.1	-0.3	-0.2	-0.1	-0.1
W	-0.1	0	0.2	0	0	0	0	0	0.1	0.1	-0.1	-0.1	0	-0.1	-0.1	-0.2	-0.1	-0.1	0	0
Y	-0.2	0.5	0	0.7	-0.3	-0.2	-0.1	0.2	-0.3	-0.1	-0.6	0.2	-0.4	-0.4	-0.2	0.2	-0.1	0.8	-0.2	0.1
D	0.2	0.2	0.2	0	0	0	0	0	-0.7	-0.1	-0.1	-0.1	0	0.1	-0.1	0	-0.1	-0.1	0	0
E	-0.1	0	0	-0.1	0	0	0	0	0.2	0.3	0.1	0.2	-0.1	-0.2	-0.1	-0.2	-0.1	-0.1	0	0
K	-0.1	0	0	0	0	0	0	0	0	-0.1	-0.1	-0.1	0	-0.1	0.2	-0.1	-0.1	-0.1	0	0
R	0.1	0	0	0.4	0.2	0	0	0	-0.5	-0.3	-0.2	0.2	-0.1	-0.4	0.1	0.3	-0.1	0	0.2	0
H	-0.1	0	0	-0.1	-0.1	0	0	0	0.7	-0.2	-0.1	-0.1	-0.1	0	0.1	0	-0.1	-0.2	0	0
N	-0.1	0	0	-0.1	-0.1	0	0	0	-0.1	0.4	0.1	0.1	0.7	0	-0.1	-0.3	-0.2	-0.2	0	0
Q	-0.1	0	0	-0.1	0	0	0	0	-0.6	-0.1	0.2	0.1	0	0.1	-0.1	-0.2	0.4	0.2	0	0
S	-0.1	0.2	-0.5	-0.5	-0.3	-0.7	1.4	-0.1	0.9	0.8	-0.2	-0.7	0.3	0.4	-0.1	0.1	-0.2	0	0	-0.3
T	0	-0.4	0.1	-0.3	-0.1	0	0.1	-0.5	1	0.1	0.3	-0.4	0.2	0.8	-0.2	0.1	-0.1	-0.1	-0.6	-0.2
G	-0.1	-0.1	-0.3	-0.1	-0.2	0.2	-0.3	0	0.2	-0.4	0.6	-0.1	0.3	0.1	0.3	-0.1	0.3	0.3	-0.1	-0.3
P	-0.1	0	0	-0.1	0	0	0	0.2	-0.4	-0.1	-0.1	-0.1	-0.1	0	-0.1	0	-0.1	-0.1	0.5	0
C	-0.2	-0.4	-0.4	1.1	-0.1	-0.3	-0.3	0.1	0.4	0.4	-0.4	-0.5	0.5	-0.1	0.1	0	0.3	-0.3	0	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0096	0.9	0.5	1.4	1.4	1.3	0.2	-0.9	-0.1	-0.7	-0.7	-0.9	-0.4	-0.9	-0.7	-0.6	-0.1	0.7	0	-0.7	0.4
0100	0.4	-1.1	-0.9	-0.6	-0.6	-1.1	-2.1	-0.6	1.8	0.9	0.8	0.6	0.2	1.4	0.3	1.2	0.4	0.7	-0.4	-1

Select residue pair below:

i_j	Score	Prob
0079_0096	1.749	1.00
0096_0106	1.536	1.00
0056_0096	1.475	1.00
0096_0133	0.915	0.87
0096_0100	0.752	0.69
0086_0096	0.612	0.46
0096_0140	0.575	0.39

Local Interactions:

i_j	Score	Prob
0096_0098	1.023	0.93
0095_0096	0.954	0.90
0094_0096	0.551	0.36

See all coupling residues
Download raw data

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