OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [D:0085] and [T:0130]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	-0.2	-0.4	0.2	-0.2	0.1	0.3	0.2	0.3	0	-0.4	0.2	0.5	-0.1	0.1	-0.1	0.1	0.1	-0.7	0.1
F	0	0.8	-0.1	-0.2	-0.4	-0.2	1	0.1	0	0	-0.4	-0.3	-0.1	-0.3	0.1	0	-0.2	0.1	-0.1	0.4
I	-0.3	0.2	0	0.1	0.7	0.1	0.5	0	0.1	-0.3	-0.4	-0.2	0.3	0	0.3	-0.1	-0.2	-0.3	-0.2	-0.6
L	0.4	-0.2	-0.2	-0.1	-0.2	-0.2	0.2	-0.2	0.3	0.2	-0.1	-0.6	0.2	0.3	-0.6	0.2	0.3	0.4	0.2	-0.1
V	0.1	-0.5	-0.3	0.1	0.1	-0.3	-0.4	0.6	1.2	-0.2	-0.1	-0.4	0.3	-0.3	-0.3	-0.1	0.1	0.2	0.4	-0.4
M	0.4	-0.2	0.3	0	0.1	-0.1	0.1	-0.1	-0.7	0	-0.1	-0.2	-0.3	0.1	0.1	0.2	0	0.6	-0.2	-0.5
W	0.3	1.1	-0.1	-0.1	0.5	0.3	-0.2	-0.2	-1	-0.4	0	-0.3	-0.5	0.2	0.4	-0.3	0.1	-0.9	0.1	0.5
Y	-0.3	-0.2	-0.1	0.1	-0.2	0.2	0	0.2	-0.5	0.4	-0.4	-0.3	-0.2	-0.4	1.1	-0.1	0	-0.1	0.5	0.4
D	0.3	0	-0.5	-0.3	0.5	-0.5	-1	-0.5	-0.8	-1.2	1.3	1.4	0.2	0.3	0.2	0.9	0.4	-0.5	-0.7	0.4
E	-0.3	-0.2	-0.1	0.2	-0.5	-0.2	0.4	-0.1	-0.4	-0.4	-0.6	0	-0.1	0.5	-0.5	0.8	0.4	0.1	0.5	0.2
K	0.3	0.2	-0.4	-0.2	0	-0.1	-0.5	-0.3	1.2	0.3	0.1	0.4	-0.2	0.1	-0.1	0.1	-0.1	0.2	0.1	-0.4
R	-0.2	0.1	-0.1	0.2	-0.5	0	-0.2	-0.4	1.1	0.5	-0.7	0.4	-0.4	0.3	-0.8	-0.5	-0.1	0.8	1.4	-0.6
H	0.7	0.3	-0.5	-0.1	0	-0.4	0.7	-0.3	-0.1	-0.3	0.1	0.2	0.2	-0.5	-0.3	-0.2	0.1	0.5	-0.1	-0.1
N	-0.3	0	0.4	0.1	0.1	0.2	-0.2	0	0.1	0	-0.1	-0.7	0.1	0.5	0	0.1	0.3	0.2	0.1	-0.6
Q	-0.4	0.1	-0.1	0	-0.4	1.1	-0.3	0.5	-0.7	0.1	0.9	-0.3	-0.5	0.5	-0.2	0	0	0	-0.2	-0.2
S	-0.1	-0.3	0.9	0.4	0.2	0.1	0	-0.2	-0.3	0.1	0.1	0.2	0.2	0	0.3	0.2	-0.2	-0.4	-0.2	0
T	-0.2	-0.3	0.7	0	0	-0.3	-0.1	0.4	0	0.6	0.6	0.5	0.1	-0.2	-0.1	0.1	-0.4	0	-0.3	-0.2
G	-0.2	-0.2	-0.2	-0.1	0	-0.2	-0.8	0.4	0.3	1	0.3	0.6	0	-0.4	0.7	-0.3	0.1	-0.3	-0.1	0.1
P	0.2	-0.1	0.1	0.5	-0.1	-0.1	0.2	-0.2	-0.4	-0.4	-0.2	-0.2	-0.2	-0.4	-0.1	-0.2	-0.7	-0.1	0.9	0.7
C	0	-0.4	0.2	-0.3	0.2	0	-0.1	0.3	0.2	0.1	0.5	-0.2	0.8	0	-0.1	0	-0.2	0.1	-1	0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0085	0.8	0.1	-0.6	0.2	-0.3	-1	-1.2	0	-0.3	-0.4	0.3	0.4	0	0.6	0.4	1.1	0.4	0.9	-0.5	0.2
0130	0.7	0	-0.5	0.5	-0.2	-0.8	-1	0	-0.1	-0.4	0.1	0.1	0.1	0.8	0.1	0.9	0.2	0.6	0.1	-0.2

Select residue pair below:

i_j	Score	Prob
0085_0097	2.641	1.00
0085_0130	0.928	0.88
0085_0131	0.885	0.85
0033_0085	0.852	0.81

Local Interactions:

i_j	Score	Prob
0085_0087	0.981	0.91
0084_0085	0.664	0.55
0083_0085	0.570	0.39

See all coupling residues
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