OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [D:0085] and [T:0087]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.6	-0.2	-0.4	-0.1	0	-0.4	-0.2	0	0.5	0	-0.4	-0.4	0.4	-0.3	0.2	0.3	0.2	0.4	-0.4	0.2
F	-0.3	0.1	-0.1	-0.1	-0.8	-0.2	0.1	-0.2	0.2	-0.3	0.2	0.3	-0.3	0.1	0	0.1	0.3	0.6	0.3	-0.3
I	-0.6	0	-0.2	-0.4	-0.4	0	0.1	-0.1	0.1	0.7	0.8	0.9	-0.1	-0.2	-0.4	0	0.1	-0.5	-0.1	-0.1
L	0	-0.6	0.1	-0.5	-0.2	0	-0.1	-0.3	0.4	0.2	0.3	0.7	0.2	-0.3	0.3	0	-0.1	0.3	-0.2	-0.1
V	-0.2	-0.1	-0.6	-0.5	-0.4	0	0.1	0.2	0.2	0.1	0.6	1.2	0.2	-0.4	0.1	-0.1	0	-0.1	0.1	-0.6
M	-0.2	0.1	-0.1	0	-0.3	0.1	0	-0.1	0.5	0	-0.5	0	0.6	0	-0.1	-0.3	0.1	0.1	-0.1	-0.1
W	-0.2	0.2	-0.6	-0.3	-0.7	0.3	-0.1	-0.3	0.2	0	0.9	0.5	-0.6	0.3	0.3	-0.3	-0.2	0	-0.1	0.1
Y	-0.5	0	0.3	0	-0.1	0.1	0.1	0.1	0	0.5	-0.1	-0.6	0	0.1	0	0.2	0.4	0	-0.1	0
D	0.4	-0.3	0.2	0.1	0.5	-0.7	-0.1	-0.5	-0.1	-0.9	0.6	-0.2	0.5	0.4	0.7	0.4	0.2	-0.4	-0.6	0.9
E	-0.2	0.5	0.1	0.1	0.2	0.1	0.1	0.8	-0.7	-0.2	-0.1	0.2	0.9	0.3	-0.4	-0.3	-0.7	-0.1	-0.1	-0.2
K	-0.3	0.4	0.8	0.5	0.6	0.8	-0.1	0.1	-0.5	0.8	-0.7	-0.3	-0.7	-0.2	0.1	-0.2	-0.1	-0.5	-0.2	0.5
R	0.1	0.2	0.5	1.2	0.6	0	0.3	-0.2	-0.6	0.4	-1	-0.1	-0.4	0	-0.4	-0.2	-0.1	0.1	-0.2	-0.1
H	0.3	-0.2	0.2	-0.7	0.3	-0.5	-0.1	-0.1	0.2	0.7	-0.5	0	0.5	0.1	0.1	0.1	0	-0.2	0.1	-0.1
N	-0.2	-0.1	0.2	0	0.7	0.2	-0.2	0.1	-0.5	-0.1	0	-0.3	0.5	-0.2	0.4	-0.1	-0.1	-0.8	1.4	-0.2
Q	0.3	0.9	0	0.5	0	0.6	-0.1	0.3	-0.9	-0.2	-0.2	-0.3	-0.1	-0.1	-0.2	-0.1	-0.1	-0.3	0	0.1
S	0.4	-0.2	0.3	0	0.4	-0.3	-0.1	0	0.4	-0.4	0.1	-0.3	-0.2	0.3	0.1	0.4	0	0	-0.7	0.5
T	0.3	-0.4	0.4	0.4	-0.2	-0.3	-0.3	-0.1	0.4	0	0	0.1	-0.1	-0.1	0.1	0.1	-0.1	0.1	0	0.1
G	0.5	0	-0.2	-0.5	0.5	-0.4	-0.2	0.8	0.7	-0.4	-0.5	-1	-0.1	0.3	-0.4	0.4	0.2	0.3	0	0.4
P	0.5	0.1	0.6	0.3	0.5	0.4	0.2	0	-0.6	-0.6	-0.5	-0.7	-0.4	-0.2	-0.7	0.4	0.3	0.2	-0.1	-0.4
C	0.3	-0.5	-0.7	-0.2	-0.4	-0.5	-0.1	-0.6	0.6	0.5	0.7	0.6	-0.2	0	0.3	0.3	0.6	0.4	-0.5	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0085	0.8	0.1	-0.6	0.2	-0.3	-1	-1.2	0	-0.3	-0.4	0.3	0.4	0	0.6	0.4	1.1	0.4	0.9	-0.5	0.2
0087	0.8	-0.3	0.4	0.6	0.9	-0.5	-1.3	-0.6	0.2	0.3	-0.3	-0.2	0.1	-0.5	0.1	0.9	0.9	0.1	-1.3	0.8

Select residue pair below:

i_j	Score	Prob
0085_0097	2.641	1.00
0085_0130	0.928	0.88
0085_0131	0.885	0.85
0033_0085	0.852	0.81

Local Interactions:

i_j	Score	Prob
0085_0087	0.981	0.91
0084_0085	0.664	0.55
0083_0085	0.570	0.39

See all coupling residues
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