OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [L:0058] and [W:0088]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	-0.3	-0.2	0	0.2	-0.4	0.2	-0.6	-0.1	-0.2	0.1	-0.2	-0.1	-0.2	-0.3	0.1	0.5	0.5	0.6	-0.1
F	-0.2	0.1	0.6	-0.3	0.1	-0.3	0.1	0.3	-0.2	1.3	-0.4	-0.2	-0.3	-0.3	0.6	0	0	-0.4	0	0.3
I	-0.1	0.4	0.1	0.2	0.2	0	0.9	0	-0.3	-0.4	0.7	0	-0.3	-0.2	0.4	-0.1	0.4	-0.5	-0.1	-0.1
L	0	0.5	0.3	0.5	0.1	0.2	0.3	-0.6	-0.1	-0.1	0.1	0.2	0.2	0.8	-0.2	0.3	0.2	-0.1	0	-0.5
V	-0.2	0.4	-0.2	0.5	0.2	0.2	0.6	0.3	-0.4	-0.2	0.2	-0.1	-0.1	-0.1	0.4	0.1	0.1	0	-0.1	0.1
M	-0.3	0.4	0.3	0.2	-0.2	0.1	0.2	0.3	-0.1	-0.1	-0.3	0	0.1	0.1	-0.3	-0.1	0.3	-0.4	0.1	-0.2
W	1.4	-0.7	-0.5	-0.6	0.4	-0.3	-0.4	0	0	-0.1	0	0.1	-0.1	0	-0.1	-0.2	0	0.2	0.1	0.2
Y	0.3	0	0.1	-0.5	-0.4	0	0.4	-0.3	0	-0.2	-0.1	-0.2	-0.4	0.1	-0.1	0.6	-0.3	0.3	-0.1	0.7
D	-0.4	-0.4	-0.4	0.2	-0.4	1.4	-0.3	-0.2	0	-0.1	0	-0.1	-0.1	0	-0.1	-0.2	0	-0.1	-0.1	0.1
E	-0.3	0.6	-0.1	-0.1	0.1	-0.4	-0.8	1.1	0	-0.1	-0.1	-0.2	0.2	0	-0.1	-0.1	-0.5	-0.1	-0.1	0.1
K	0.5	-0.7	0.8	-0.1	0.7	0	0.5	-0.1	0.2	-0.1	-0.1	-0.1	-0.3	-0.2	-0.2	0.1	-0.4	-0.1	-0.6	0
R	0.4	-0.6	-0.1	0.5	0.6	-0.8	0	-0.1	-0.1	-0.1	-0.2	0.4	-0.1	-0.1	-0.2	0.2	0.3	0	0	0
H	0.5	-0.1	-0.6	-0.5	-0.1	-0.3	-0.8	-0.2	0	-0.1	-0.1	0.3	1.2	0.2	0	0.2	0.2	-0.1	-0.2	0
N	-0.3	-0.5	0.2	0.5	-0.4	0.3	0.1	0	0	-0.1	0	-0.1	-0.1	0	-0.1	-0.2	0	-0.1	0.1	-0.2
Q	-0.5	-0.1	0.3	-0.3	0.6	-0.4	0.2	0.9	-0.1	0.3	0.1	-0.3	0.1	-0.1	-0.2	0	0.1	-0.1	-0.2	-0.4
S	-0.7	0.2	0.1	0.1	0	0.6	0.1	0.3	-0.1	-0.3	0.1	0	0	-0.1	0	0.3	0	0.1	0.1	-0.2
T	-0.4	0.2	0.6	0.2	-0.3	0	0.2	-0.2	0.1	0.1	-0.2	-0.3	0.2	-0.1	0.1	-0.3	-0.1	0.7	0	-0.1
G	0.2	0.1	-0.6	-0.3	-0.3	-0.2	-0.6	0.8	0.2	0.1	0	0.9	-0.1	-0.1	0.1	-0.4	-0.2	-0.1	0	-0.2
P	-0.3	0.9	-0.3	-0.2	0	-0.1	-0.7	-0.4	0	0.2	0	0.2	-0.1	0	0	-0.1	-0.1	0.2	0.1	-0.1
C	0.1	0.4	0.1	0.1	-0.6	0	-0.1	-0.2	0.2	-0.3	-0.2	-0.4	0	-0.1	0	-0.3	-0.5	-0.1	0.7	1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0058	0.5	1	2.2	2.4	2.4	0.6	-1.4	-0.6	-1.5	-1	-0.2	0.2	-0.9	-1.4	-0.1	0.4	0.4	-0.8	-1.7	-0.1
0088	0.3	1.2	0.7	0.9	0.6	-0.2	0.6	0.9	-1.3	-0.5	-0.9	-0.4	-0.3	-0.9	-0.4	0	0.2	-0.2	0	0

Select residue pair below:

i_j	Score	Prob
0044_0058	1.540	1.00
0042_0058	0.815	0.77
0058_0088	0.701	0.61

Local Interactions:

i_j

Score

Prob

See all coupling residues
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