May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0042] and [L:0058]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.1 -0.2 0.1 -0.2 0.2 0.1 0.4 0.2 0.1 0.3 0.3 -0.1 -0.2 -0.4 -0.1 -0.1 0 -0.1 -0.5
F 0.1 -0.1 0.5 0.1 0.6 0.6 -0.5 0.7 -0.4 -0.7 0.8 0.3 0.4 -0.5 0.3 -0.3 -0.3 -0.3 -0.3 -0.5
I 0.6 -0.2 -0.2 0.2 -0.5 0.3 -0.4 0.9 -0.2 1.2 -0.7 -0.6 -0.2 0 0.4 0.3 0.2 0.3 0.1 -0.8
L 0.4 -0.2 0.5 0.6 0.6 0.3 -0.1 -0.2 -0.3 -0.2 -0.7 -0.7 0.2 -0.5 0.5 0.3 0.4 0.2 -0.5 -0.1
V 0.8 0 -0.6 0.3 -0.5 0.3 0.2 -0.5 -0.4 0.1 -0.2 -0.2 -0.5 0.1 0.4 0.7 0.9 0.1 -0.1 -0.1
M 0.2 -0.1 0.2 0.4 0.3 0.3 -0.2 -0.1 -0.2 -0.1 -0.3 -0.7 -0.1 -0.1 0 0.4 -0.3 -0.1 -0.2 0.4
W 0.2 -1 0.3 0.1 0.6 0.1 -0.3 -0.2 -0.2 -0.3 1.8 0.2 -0.3 -0.2 -0.2 -0.5 -0.2 -0.5 1 -0.9
Y 0.5 -0.3 0.7 0.2 0.7 -0.1 -0.2 -0.1 -0.5 -0.3 1.7 -0.2 -0.7 -0.3 -0.4 -0.2 -0.8 -0.8 1 0.7
D -0.4 0 -0.1 -0.7 -0.6 -0.7 0 0.4 -0.1 0.1 -0.1 -0.2 0.7 0.1 0.2 -0.5 -0.4 -0.2 -0.1 1.9
E -0.5 0.3 -0.1 -0.3 0.1 -0.2 0 -0.2 -0.2 -0.4 -0.2 1.5 0.2 0.3 -0.6 -0.2 -0.2 0 0.1 0.2
K 0 -0.4 1 0 0.6 0.4 -0.3 0.1 0.4 0.7 -0.6 -0.8 -0.3 0 0.2 -0.1 -0.4 -0.5 -0.3 -0.2
R 0.3 -0.1 0.2 -0.1 0.1 0.6 -0.9 -0.5 -0.1 0 -1.4 -1 0 0.8 0.3 0.7 0.9 0.9 -0.1 -0.5
H -0.1 -0.3 -0.1 -0.2 0.3 -0.1 0.3 0 1.8 -0.8 0.3 0.1 -0.3 0 -0.1 0 0 -0.2 -0.4 0.2
N -0.8 0.6 0 0.2 0 -0.1 0 -0.3 -0.2 -0.2 0.5 -0.5 0.4 0.3 0.3 0.1 -0.4 -0.4 -0.2 0.3
Q -0.2 -0.4 0.4 0.6 0.3 -0.5 0.2 -0.4 -0.1 0.4 -0.5 0.9 -0.3 0 -0.2 -0.4 0.2 -0.1 -0.2 0.3
S -0.1 0.2 -0.1 -0.3 -0.1 0.3 0.2 -0.4 0.3 0.3 -0.2 0.8 0.5 -0.1 -0.2 -0.3 0.5 0.1 -0.3 -0.3
T 0.3 0 -0.4 0.6 -0.4 0.3 -0.1 0 -0.1 0.4 -0.4 0.5 -0.1 -0.1 0.3 0 0.1 0.1 -0.3 -0.3
G -0.4 1.5 -0.6 -0.4 -0.6 0 0.3 0.9 0.1 -0.1 -0.5 -0.1 0 0.1 -0.3 0.3 0 -0.1 0.1 -0.3
P -0.2 0.8 0.5 0.3 0.5 -0.6 -0.1 -0.4 -0.1 -0.3 -0.3 -0.1 0 -0.1 -0.4 -0.1 0.7 -0.3 0 -0.2
C -0.2 0 -0.2 -0.3 0 -0.4 -0.2 0.1 -0.3 -0.4 -0.3 -0.7 -0.2 -0.1 -0.2 0.1 0.1 1.3 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0042 0.2 0.3 0.8 1 0.8 -0.8 -0.8 0.3 -0.5 -0.2 -0.5 0.2 0 -0.4 -0.3 0.6 0.1 -0.2 -0.6 -0.6
0058 0.5 1 2.2 2.4 2.4 0.6 -1.4 -0.6 -1.5 -1 -0.2 0.2 -0.9 -1.4 -0.1 0.4 0.4 -0.8 -1.7 -0.1
Select residue pair below:
i_j Score Prob
0044_0058 1.540 1.00
0042_0058 0.815 0.77
0058_0088 0.701 0.61
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.023 seconds.