May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0044] and [L:0086]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.8 -0.2 0.7 0.8 0.6 0.4 -0.4 -0.4 0.2 0.1 0.3 -0.4 0.2 0.1 -0.7 -0.3 -0.1 -0.5 0 -0.2
F 0.6 -0.3 0.7 0.6 0.2 0.5 -0.1 -0.5 -0.1 0.1 -0.1 0.3 -0.2 -0.2 -0.3 -0.3 -0.3 -0.1 -0.1 0.4
I 0.3 0.3 0.5 0.3 0.6 0.3 0.5 -0.4 -0.2 0.1 0 -0.2 0.1 -0.4 -0.3 -0.2 0.2 -0.5 0.2 -0.3
L 0.8 -0.4 0.1 0 0 -0.3 -0.1 0.8 -0.4 -0.2 -0.2 0.3 -0.1 -0.2 -0.1 0.3 0.4 0.7 -0.3 0.1
V 0.5 0.1 0.1 0.3 0.6 0 -0.4 -0.1 0 -0.5 -0.4 0.1 -0.4 -0.3 -0.4 0 0.4 0.4 -0.1 0.5
M 0.6 0.4 -0.1 0 -0.4 0.6 -0.1 -0.4 -0.1 -0.1 -0.1 0 -0.1 0.1 0.3 -0.1 -0.3 0.8 -0.2 -0.4
W -0.2 -0.3 -0.2 0.5 0.1 -0.3 0 0 0 0 0 0 0 0.2 0 -0.1 0.1 -0.1 0 0.3
Y 0.1 0.9 0.6 0.1 -0.2 -0.1 -0.1 0 -0.1 0.1 -0.1 -0.2 -0.2 -0.1 -0.2 0.4 -0.4 -0.1 -0.3 0.5
D -0.1 -0.1 -0.2 -0.2 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0.2 0 -0.1
E 0.2 -0.1 0 -0.1 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0.2 0 0 0 -0.1
K 0 -0.1 -0.2 0.3 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
R -0.3 -0.2 -0.2 0.1 0.4 0.4 0 0.1 0 0 0 0 0 0 0 -0.1 0.2 -0.1 0 -0.2
H 0.3 -0.1 -0.1 -0.5 -0.1 -0.2 0 0 0 0 0.2 0 0.2 0 0 -0.1 0 -0.1 0.2 0.1
N -0.3 0.1 -0.2 -0.3 0.5 0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 -0.1
Q 0.2 -0.1 0.1 -0.2 -0.3 0.1 0 0 0 0 0 0 0 0 0 0.1 -0.1 0 0 -0.1
S -1 -0.5 -0.7 -0.1 -0.2 -0.2 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 0.2 -0.1 1 0.7 0.9 0.1 0.5 -0.2
T 0.4 0.6 0 -0.1 0 -0.4 -0.2 0.8 0 -0.1 -0.1 -0.2 -0.1 -0.1 0.2 0.3 -0.1 -0.4 -0.2 -0.3
G -0.6 0.6 0.3 0.4 -0.3 0.5 -0.1 -0.1 0 0 0 -0.1 -0.1 0.5 -0.1 0.2 -0.3 -0.4 0.1 -0.4
P 0.3 0 -0.1 -0.2 -0.1 -0.2 0 0 0 0 0 0 0 0 0.2 0.1 0.1 -0.1 0 0
C 0.1 0.2 0 -0.5 0.4 0.1 0.1 0.1 0 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.3 -0.2 0 -0.1 0.9
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0044 -0.3 0.4 1.6 2 1.5 0.4 -0.2 0.1 -1 -0.7 -0.9 -0.1 -0.3 -0.6 -0.6 0.3 0.3 0 -0.2 -0.7
0086 1.2 1 1.9 1.9 1.5 1 -1.4 -0.8 -1.1 -1 -1 -0.8 -0.9 -0.8 -1 0.7 0.1 0.1 -0.5 0.5
Select residue pair below:
i_j Score Prob
0044_0088 1.881 1.00
0044_0086 1.578 1.00
0044_0058 1.540 1.00
0044_0095 0.729 0.65
0044_0094 0.714 0.63
0044_0047 0.623 0.48
0035_0044 0.561 0.37
Local Interactions:
i_j Score Prob
0042_0044 0.955 0.90
0043_0044 0.812 0.77
0044_0045 0.800 0.75
0044_0046 0.596 0.43
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0144 seconds.