OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [Y:0036] and [W:0220]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0	0.4	0.2	0.5	0.6	0	0	0	0.4	-0.2	-0.4	0.1	-0.3	-0.2	-0.2	-0.3	-0.2	0.4	-0.3
F	0.1	0.5	-0.2	0.1	0	-0.1	-0.2	0.3	-0.4	-0.5	0	-0.1	-0.4	0.4	-0.1	0.6	0.5	0.2	0.2	0.2
I	0.1	0.2	0.6	0.3	0.3	0.1	-0.1	0.2	0	-0.1	0.1	-0.5	-0.1	0.1	-0.5	0.3	0.1	-0.5	-0.2	0.3
L	-0.2	0.1	0.2	0.5	0	0.3	-1.1	0.3	-0.1	0.1	-0.1	-0.1	-0.3	0.3	0.4	-0.1	0.3	0.2	-0.2	0.1
V	-0.2	0.2	0.2	0.1	0.4	0.2	-0.1	0.1	0.1	0.3	0.2	0	0	-0.3	0.2	-0.7	0	-0.2	0	0.3
M	0.4	0.1	0.2	0	0.2	0.8	-0.5	0.2	-0.1	-0.1	-0.2	-0.2	-0.1	0.1	0	-0.1	0.1	0.5	-0.4	-0.7
W	-0.3	0.1	-0.6	-0.1	-0.7	-1.1	0.8	0	-0.6	0	0.4	1.2	0.2	0.1	0.3	0.1	0.2	-0.2	0.2	0.2
Y	-0.2	0.1	-0.4	-0.2	-0.1	-0.3	0	0.7	-0.2	-0.4	-0.1	0.1	0.1	-0.3	0.3	0.3	-0.1	-0.1	0.7	0.1
D	0.1	-0.7	0.1	-0.3	-0.1	0.5	-0.1	0	0	0	0	-0.1	0	0	0.2	0.2	-0.1	0	-0.1	-0.1
E	0.1	-0.1	0	-0.1	0.1	0	-0.4	-0.1	0	0	0.2	-0.1	0	0	0	-0.1	-0.1	0	-0.1	-0.1
K	0	0.6	-0.5	-0.3	-0.3	-0.2	0.5	-0.2	0	0	-0.1	-0.1	0.1	0	-0.1	-0.1	0.1	0	-0.1	0
R	0.4	0.3	-0.6	-0.5	-0.2	-0.1	0.3	0	-0.1	-0.1	-0.1	-0.1	-0.1	0	0.2	0	0.2	0.1	-0.2	-0.1
H	-0.3	0	-0.3	0	-0.1	-0.1	0.5	0.1	0.2	-0.1	-0.2	-0.1	-0.1	-0.1	-0.1	0	0	0.3	0	0.5
N	0.1	-0.6	-0.2	-0.3	-0.7	0.2	0.9	-0.2	0.2	0.4	-0.1	-0.1	0.1	0	-0.1	-0.1	0.1	0	-0.1	0
Q	-0.1	-0.2	0.6	-0.3	0.2	0.1	-0.8	0	0	-0.1	0.2	0	-0.1	0	-0.1	0	-0.2	-0.1	0.1	0.1
S	0.1	0.1	0.2	0.2	0.4	-0.7	0.5	-0.5	0.7	0.1	-0.1	0.1	-0.2	-0.1	0.4	0.4	-0.1	0	-0.4	-0.6
T	0.1	-0.2	0.2	0.1	0.1	0.1	-0.4	-0.3	0.1	0.2	0	-0.5	0.7	-0.2	-0.2	0.1	-0.3	0.3	0.3	0.4
G	0.5	-0.1	-0.3	0.1	0.4	-0.3	-0.1	-0.5	0.1	-0.1	-0.1	-0.1	0.2	0.5	-0.1	0	0	-0.1	0.1	-0.2
P	0.2	0	0.1	0.1	0.2	0.7	0	-0.2	-0.1	-0.1	-0.1	0	-0.2	-0.1	-0.1	-0.2	-0.2	-0.1	-0.2	-0.3
C	-0.6	-0.2	0.4	0.5	-0.4	0.1	0.1	0.2	-0.2	0	-0.2	-0.2	0.2	-0.1	-0.1	0.2	0.1	-0.3	-0.1	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0036	0.3	1.4	0.6	1	1.1	0	0.4	0.3	-1	-0.8	-0.5	-0.3	-0.5	-0.6	-0.6	0.2	0.5	-0.5	-0.3	-0.2
0220	0.7	0.7	0.4	0.8	0.9	0.2	-0.3	0.1	-0.6	-0.4	-0.6	-0.8	-0.1	-0.6	-0.2	0	0.3	-0.3	0	0

Select residue pair below:

i_j	Score	Prob
0036_0043	0.882	0.84
0036_0061	0.790	0.74
0036_0306	0.736	0.66
0036_0220	0.676	0.57
0036_0313	0.640	0.50
0036_0307	0.636	0.50
0036_0263	0.598	0.43
0036_0133	0.581	0.40

Local Interactions:

i_j	Score	Prob
0035_0036	0.781	0.73
0036_0037	0.530	0.32

See all coupling residues
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