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Coupling matrix for [R:0035] and [Y:0036]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0.1 0.5 0.4 0.6 0.4 0.3 -0.1 -0.5 -0.6 -0.2 -0.3 0.1 -0.8 0.4 0.4 0.4 -0.2 -0.1 0.2
F -0.1 -0.6 0.3 0.2 -0.2 -0.1 -0.3 -0.3 0 0.1 0.3 0.1 0.6 0.5 0.1 0.1 0 0.1 0 -0.1
I -0.3 -0.3 -0.3 -0.1 -0.7 -0.3 -0.6 -0.3 0.1 0.3 0.3 0.2 0.7 0.6 0 0.5 0.3 0 0.1 0.2
L -0.2 0 -0.1 0.7 -0.5 0.3 0.1 -0.1 0.3 -0.2 0.3 0.3 -0.2 0.1 -0.4 -0.7 0 0.1 0.1 0.6
V 0.4 -0.3 -0.4 -0.1 -0.1 0.2 -0.2 -0.8 0.1 -0.2 -0.1 0.5 -0.3 0.7 0.1 0.7 0.2 0.3 0.5 -0.1
M -0.2 0.3 -0.2 -0.2 0.1 -0.2 0 0.1 0 -0.1 0.1 0.1 0.6 0.3 0 -0.3 -0.4 -0.1 -0.2 -0.1
W 0.1 -0.2 -0.3 -0.1 -0.3 -0.1 -0.5 0.4 0 0 0 -0.1 0.4 0 0.2 -0.1 -0.1 0 0 -0.1
Y 0.7 0 -0.4 0.1 -0.4 -0.1 -0.6 -0.2 0 0.2 0.2 0.1 -0.2 -0.1 -0.1 -0.2 0.5 -0.1 0.1 0.1
D 0.1 -0.3 1 -0.2 0.8 -0.1 0.3 0.2 -0.1 -0.3 0.3 0.3 -0.1 -0.3 -0.1 0.3 -0.2 -0.1 -1 0
E -0.3 0.6 0.4 -0.1 -0.3 -0.2 0.6 -0.1 -0.1 0.4 -0.1 -0.5 0 -0.1 0.3 -0.1 0 -0.3 0.5 0.1
K -0.4 0.6 0.3 0.3 0.1 -0.1 0.6 0.8 -0.2 -0.3 -0.2 -0.3 -0.4 -0.1 -0.2 -0.3 0.3 -0.4 -0.1 -0.4
R 0.2 0.5 0.1 0.4 0.2 -0.1 0 0.5 0.1 -0.3 0.4 -0.2 -0.7 0 -0.4 -0.5 -0.2 0.6 -0.2 -0.2
H 0.4 0.3 -0.3 -0.2 0.6 -0.6 0.6 -0.2 -0.1 0.1 -0.2 -0.3 -0.3 0 0.1 -0.5 -0.5 0 0.8 0.1
N 0.1 0.2 0.2 -0.7 0.1 -0.3 0.3 0.5 -0.1 -0.1 -0.1 0.3 0.1 0.1 0 -0.5 0 0.1 -0.2 -0.4
Q -0.2 1 -0.5 0.4 -0.1 0.4 0.6 0.8 -0.1 0 -0.3 -0.1 -0.3 -0.3 -0.2 -0.3 -0.5 -0.3 0.2 0.5
S 0.2 0.2 0.4 0.6 0.5 0.1 0.6 0.2 0.1 0 -0.7 -0.9 -0.2 -0.4 0 0.5 0.1 -0.4 -0.3 0.5
T 0 0.3 0.5 0.3 0.2 0.3 -0.1 0.2 0 0 -0.1 -0.6 0 -0.1 -0.4 0.4 0.5 0 -0.2 -0.2
G -1.1 0.4 0.4 0.1 0.3 -0.5 0.4 0 0.1 0 0.3 0.2 0.2 -0.2 0.1 -0.6 -0.3 0.2 -0.5 -0.4
P 0.5 -0.8 -0.3 -0.7 0.1 -0.2 -0.3 -0.3 0 0.2 -0.1 -0.1 0.1 0.2 -0.1 0.9 0.2 0.5 -0.1 0
C 0.2 0.1 0.1 0.3 0.2 0.1 0 0 -0.2 0.3 -0.5 0.8 -0.2 -0.3 0.4 0.1 0 -0.2 0.2 -0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0035 1.2 0.1 0.4 0.5 0.7 -0.6 -1.4 -0.4 -0.3 0.1 -0.3 -0.1 -0.2 -0.2 -0.1 1 1 -0.1 -0.5 0.4
0036 0.3 1.4 0.6 1 1.1 0 0.4 0.3 -1 -0.8 -0.5 -0.3 -0.5 -0.6 -0.6 0.2 0.5 -0.5 -0.3 -0.2
Select residue pair below:
i_j Score Prob
0036_0043 0.882 0.84
0036_0061 0.790 0.74
0036_0306 0.736 0.66
0036_0220 0.676 0.57
0036_0313 0.640 0.50
0036_0307 0.636 0.50
0036_0263 0.598 0.43
0036_0133 0.581 0.40
Local Interactions:
i_j Score Prob
0035_0036 0.781 0.73
0036_0037 0.530 0.32
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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