OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [P:0021] and [A:0025]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	-0.6	-0.2	0.1	0	0.1	0.2	0.1	0.7	0.1	-0.3	-0.1	0	0.2	-0.2	0.2	-0.4	-0.3	0.1	-0.1
F	0.2	0.2	-0.7	0.2	-0.1	0.1	-0.1	1.2	-0.3	0.3	0.3	0	-0.2	-0.1	-0.8	-0.2	-0.2	0.1	-0.6	-0.1
I	-0.3	0	0	0.3	-0.6	-0.2	0.2	0	0.1	0.2	-0.2	-0.3	-0.2	-0.1	0.6	-0.1	-0.3	-0.3	1.1	0.1
L	0.1	1.2	-0.4	0.3	-0.1	-0.2	-0.2	0.1	0	1.4	-0.1	-0.8	-0.2	0.5	-0.2	-0.4	-0.9	-0.2	0.8	0.1
V	-0.1	0.2	-0.1	0	-0.2	0	0	-0.2	0	0.5	0.2	-0.5	1	-0.2	0.1	-0.4	-0.8	-0.1	0.6	0
M	0	1.1	-0.3	-0.2	-0.7	-0.2	-0.1	0.3	-0.2	0.7	0.2	0.4	-0.3	-0.2	-0.1	-0.5	-0.3	0.2	0.1	-0.1
W	0.7	-0.1	0	0	-0.2	-0.1	0	-0.1	-0.1	-0.2	0.3	0	-0.1	-0.1	-0.1	-0.2	0	-0.1	-0.2	0
Y	-0.3	0.2	0.1	0.4	0.5	0	-0.1	0.3	0.1	0	-0.3	0.3	0.2	-0.4	-0.2	-0.5	-0.6	0.2	-0.1	0.1
D	0.3	-0.6	0.5	0.6	0.6	-0.4	-0.4	-0.7	-0.6	-0.6	0.4	0	0	0.1	-0.1	0.1	0.6	0.1	0.3	0.2
E	0.2	-0.2	0.1	-0.7	-0.1	-0.1	0	-0.4	-0.1	-0.6	0.6	0	0.6	0	0.4	0.5	0.2	0.2	0	-0.2
K	-0.7	-0.1	0.1	-0.2	0.2	0.6	0.6	0.5	0.2	-0.2	-0.3	-0.2	-0.1	-0.1	0.1	0.1	-0.2	0.6	-0.3	0.5
R	-0.1	-0.5	0.5	0	-0.6	-0.1	0.3	-0.1	0.4	-0.3	0.5	-0.1	-0.6	1.3	-0.3	0.4	0.1	0.5	0.1	-0.3
H	0.3	-0.4	-0.2	-0.2	0.3	0.2	0.1	0.1	0.2	-0.1	-0.2	0.1	-0.5	-0.1	0.4	-0.1	-0.1	-0.2	-0.1	-0.1
N	-0.4	1.2	0.4	0	-0.2	0.2	-0.3	0	0.1	0.2	-0.1	-0.3	-0.4	0.6	-0.1	-0.1	0.4	-0.1	-0.6	0.3
Q	-0.2	-0.5	0.4	-0.6	0.3	0	0.1	-0.6	0.5	0	0.4	-0.1	0	-0.1	0.8	0.5	-0.1	0	0.1	-0.2
S	0.2	-0.5	0.4	0.5	0.5	-0.2	-0.4	0.6	-0.1	-0.1	-0.2	0.1	0.1	0	0.2	0.4	0.7	-0.5	-0.4	-0.3
T	0.2	-0.2	0.5	0.4	0.6	0.1	-0.3	-0.5	0.1	0.5	0.2	0.1	-0.2	-0.1	0.4	0	0.4	-0.2	-0.7	-0.3
G	0.2	0.1	-0.6	-0.4	0.5	0	-0.2	0	-0.6	-0.5	-0.2	0.7	0.5	-0.3	0.1	0.2	0.4	0.5	-0.1	-0.2
P	0.3	-0.4	-0.1	-0.8	-0.2	-0.4	-0.1	-0.6	0.3	-0.1	-0.1	0.8	-0.1	-0.1	0.2	0.2	0.6	0.1	0.3	0
C	-0.4	0.2	0.3	1.6	0.2	-0.1	0	0	-0.3	-0.4	-0.3	0.1	-0.2	-0.4	-0.4	-0.2	0	0	-0.4	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0021	0.3	-0.9	-0.8	0.2	-0.1	-0.7	-1.4	-0.9	1.1	0.7	0.5	0.6	-0.2	0.9	0.2	1.1	1.1	0.7	0.3	-1.6
0025	0.4	-0.3	0.6	1.1	0.8	-0.9	-1.7	-0.8	-0.1	0.6	0.8	0.7	-0.3	-0.2	0.9	0.1	0.2	-0.5	0.3	-1.6

Select residue pair below:

i_j	Score	Prob
0018_0021	1.110	0.96
0021_0025	0.555	0.36

Local Interactions:

i_j	Score	Prob
0021_0022	1.344	0.99
0020_0021	0.811	0.77
0021_0023	0.631	0.49

See all coupling residues
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