OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [N:0018] and [P:0021]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	-0.1	-0.1	-0.5	0.2	-0.1	0.1	-0.3	0.5	0.3	0.3	0.2	0	-0.4	0	-0.4	0.1	0	0.2	0
F	-0.1	-0.1	0	0.1	0.2	0	0	0	0	-0.2	0.1	-0.2	-0.1	0.5	-0.1	-0.3	-0.1	0.1	-0.1	0
I	-0.2	-0.1	-0.1	0.5	-0.1	-0.1	0	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	0	0.3	-0.2	-0.2	-0.2	0.1	-0.1
L	0.1	-0.1	-0.1	0.3	-0.2	0.2	0	0.4	0.2	-0.4	0.2	0	0.5	-0.1	-0.3	0.6	-0.7	0.2	-0.2	-0.1
V	0.2	0.1	0.1	-0.3	0.3	0	0.2	-0.1	-0.7	0.7	0.3	-0.2	-0.2	0	0	-0.1	-0.2	-0.1	0	-0.1
M	0.1	0	0	-0.1	-0.1	0	0	0.2	-0.2	-0.1	0.6	-0.2	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0
W	-0.1	0	0	-0.1	-0.1	0	0.2	0	-0.2	-0.1	-0.1	0.1	-0.1	0.5	-0.1	-0.1	-0.1	-0.2	0.1	0
Y	0.1	-0.1	-0.1	-0.2	0.1	-0.1	0	-0.1	0.1	0	0.1	-0.1	-0.1	-0.3	-0.1	0	0	0.2	0.1	-0.1
D	0.7	-0.4	0.2	-0.1	-0.2	0.2	-0.6	-0.5	-0.2	0	0.7	0.2	0	0.2	0.1	0.5	0.8	-0.1	-0.5	-0.1
E	-0.1	-0.2	0.2	0.3	0.1	0.2	-0.2	-0.4	-0.3	0.2	-0.1	0.2	-0.2	-0.4	0	0.7	0.1	-0.3	0.6	0
K	-0.5	-0.4	0	-0.4	-0.5	-0.4	-0.1	-0.1	0.2	0.4	0.7	0.3	0.4	0.5	0.5	-0.7	0	0.4	0.1	0.4
R	0.1	-0.3	-0.1	-0.3	0.3	-0.3	-0.2	-0.5	1.2	0	-0.4	0.2	0.3	0.3	0.4	-0.3	-0.5	0.5	0.4	0.4
H	-0.2	-0.3	-0.2	-0.1	-0.3	-0.2	-0.1	0	0.5	0.3	0.5	0.1	0.2	-0.1	-0.3	0.7	0.4	-0.5	-0.1	-0.2
N	0.1	0.7	-0.5	0.5	-0.3	0.3	-0.4	0.6	-0.1	-0.2	0.2	0.4	-0.3	0.1	0.2	0.3	0.5	-0.4	-0.3	-0.8
Q	-0.2	0.1	-0.3	-0.3	0	-0.2	0.2	0.6	0.3	0.1	-0.2	-0.1	0	0.1	-0.1	0.3	-0.2	0.1	0	-0.3
S	-0.1	0.4	0.1	0.3	-0.6	0.1	0	-0.1	0.4	-0.1	-0.4	-0.6	-0.6	0.1	0.2	0.1	0.5	-0.1	0.1	0.8
T	0.3	-0.6	-0.2	0.1	0.4	-0.1	0.5	0.1	-0.4	-0.3	-0.4	0.1	0	0.8	-0.4	0.3	0.1	0.3	-0.1	-0.3
G	0	-0.3	0	1	0	-0.1	-0.1	-0.1	0.3	0	-0.5	-0.4	0	-0.4	-0.1	0	0.1	0	-0.3	-0.2
P	0.2	0.8	0.2	0.2	0.2	-0.1	-0.1	0.1	0.1	-0.1	-0.3	0.1	0.2	-0.5	0.2	-0.7	-0.3	0.9	0.1	-0.2
C	-0.2	0.1	-0.1	0	-0.1	-0.1	0	-0.1	-0.3	-0.1	-0.2	-0.3	0.1	0	0.1	0	0.9	-0.1	0.4	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0018	0.5	-0.7	-0.7	0.2	-0.1	-0.8	-1.2	-0.7	1	0.6	0.7	0.8	-0.2	0.7	0.1	1.2	0.8	0.4	0.3	-0.7
0021	0.3	-0.9	-0.8	0.2	-0.1	-0.7	-1.4	-0.9	1.1	0.7	0.5	0.6	-0.2	0.9	0.2	1.1	1.1	0.7	0.3	-1.6

Select residue pair below:

i_j	Score	Prob
0018_0021	1.110	0.96
0021_0025	0.555	0.36

Local Interactions:

i_j	Score	Prob
0021_0022	1.344	0.99
0020_0021	0.811	0.77
0021_0023	0.631	0.49

See all coupling residues
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