OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [P:0012] and [A:0013]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.6	0.1	0.3	0.2	-0.7	0	-0.1	0.2	0	0	0	-0.2	1.5	-0.1	-0.4	-0.4	-0.3	0.5	0.1	-0.2
F	-0.4	0.1	-0.2	0.7	0	0.3	0	0.1	0	-0.1	0.4	-0.2	-0.2	-0.5	0	0.2	-0.5	0.1	-0.1	0.1
I	-0.2	-0.1	-0.1	-0.3	-0.1	-0.2	0	-0.1	-0.2	-0.2	-0.2	0.3	-0.2	-0.1	-0.1	0.2	0.4	0.6	-0.1	0.1
L	-0.2	0.1	0.5	0.1	0	-0.2	0	0.1	0	-0.3	-0.1	-0.3	0	0	0.2	0.1	-0.3	0.1	0.1	-0.2
V	-0.3	-0.2	0.1	-0.2	0.1	-0.2	0	0.1	-0.2	-0.1	-0.3	-0.1	-0.2	-0.2	-0.2	-0.2	-1	2.4	0.1	-0.2
M	-0.2	-0.1	-0.1	-0.3	0	0.1	0	-0.1	-0.1	0.1	0	0	0.1	-0.3	-0.1	-0.2	0.3	0	-0.1	0.1
W	-0.1	-0.1	-0.1	-0.2	-0.2	-0.1	0	-0.1	-0.1	-0.1	-0.2	-0.1	-0.2	0.2	-0.1	0.5	0	0.1	-0.1	0.1
Y	0.5	-0.3	-0.2	0.7	-0.4	1.2	-0.1	-0.1	-0.2	0.1	-0.6	-0.2	-0.2	-0.5	0.2	0.1	0	-0.3	-0.3	0.8
D	0.4	0.3	-0.5	0	-0.3	0.1	-0.1	0.1	-0.6	0.4	0.5	0.5	-0.2	-0.2	0	0.1	0.3	-0.1	0.1	-0.1
E	0.3	-0.4	-0.2	-0.6	-0.5	-0.4	-0.1	0.2	0.8	0.6	0.3	0.7	-0.6	0	0.3	0.3	-0.2	0	-0.2	0.3
K	-0.1	0.1	0.1	-0.6	0.5	-0.4	0.1	-0.5	0.2	0.1	0.2	-0.2	0	0	0.2	0.3	0.7	-0.5	0.2	0
R	-0.4	-0.2	0.4	0	0.2	-0.1	0	0.1	0.3	0.2	-0.5	0.2	-0.2	0.2	0.7	-0.2	0.6	-0.8	0.2	-0.1
H	-0.4	0.2	0	0.3	0.4	-0.3	-0.1	-0.1	0.2	0.1	-0.1	0	-0.5	0.8	-0.1	0	0.5	-0.4	-0.1	-0.2
N	1	0.4	-0.2	0	-0.2	0.2	0	-0.5	-0.3	0.7	0.2	-0.3	-0.4	-0.4	0.6	0.5	0.7	-0.2	-0.7	0
Q	-0.5	-0.2	0.2	-0.5	0.4	-0.1	-0.1	-0.3	0.3	-0.5	-0.5	-0.6	0.3	1.5	-0.1	-0.3	0.9	0	0	0.1
S	0	0.9	0.1	0.7	-0.1	0	0	0.4	-0.3	-0.3	0.3	0.1	0.5	0	-0.3	-0.2	0	-0.2	-0.2	0.4
T	-0.2	-0.2	-0.5	0.3	0.2	-0.1	-0.1	0.5	-0.2	0.2	-0.3	0	-0.6	0.4	-0.4	0.3	0.4	0.3	0.5	0
G	0.3	-0.4	0.7	-0.1	0.6	-0.1	0.1	0.1	0.7	0.7	0.4	0.8	0.1	-0.3	0.2	-0.5	-0.3	-0.3	-0.2	-0.4
P	1	0.1	0.2	0.1	0.3	-0.3	-0.2	0.7	-0.3	-0.5	-0.5	-0.4	1.4	0.3	-0.4	0.4	-0.6	-0.6	0.5	0.4
C	-0.5	-0.3	-0.3	0.2	0.5	0.2	-0.1	-0.2	0.5	0	-0.1	-0.3	-0.3	0	0.2	0.5	0.1	0.1	0	-0.4

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0012	0.7	-0.9	-1.2	-0.8	-1.2	-1.4	-1.5	-0.2	0.3	0.4	0.1	0.2	-0.2	1	-0.4	1.4	0.1	3.3	1.6	-0.6
0013	0.3	-0.3	-0.4	0.5	0.3	-0.2	-1.9	-0.2	-0.1	0.2	0.3	0.2	0.1	0.9	0	1.2	1.3	0.4	-0.5	0

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0011_0013	1.423	1.00
0013_0015	0.924	0.88
0012_0013	0.689	0.59

See all coupling residues
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