OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [P:0011] and [A:0013]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	0.1	-0.1	0.3	0	-0.7	-0.2	0.1	-0.1	1.2	-0.2	-0.7	0.2	0.6	-0.6	0.2	-0.1	0.4	0	0
F	0.1	0.1	-0.1	0	0	-0.1	0	0.1	-0.2	0	0.2	0.1	-0.2	0.1	-0.1	0	-0.3	0.3	-0.1	-0.1
I	-0.2	-0.1	0	0.2	0	-0.1	0	0.2	-0.2	-0.1	-0.2	0.3	0.9	-0.3	-0.1	-0.3	-0.7	0.5	-0.1	0
L	-0.7	0.2	-0.2	0.1	-0.3	0.1	-0.1	-0.3	-0.3	-0.2	0.1	0.9	0.9	-0.2	-0.2	-0.3	0.4	-0.3	0.2	-0.1
V	0	0.1	-0.4	0.1	0	0	-0.1	0.4	-0.1	-0.2	-0.3	0.1	0.1	0.5	0.1	-0.5	-0.9	0.7	-0.2	0.6
M	-0.3	-0.1	0	0.1	0	-0.1	0	-0.2	-0.2	-0.1	-0.3	-0.3	0.5	0.1	-0.2	-0.2	-0.1	0.3	-0.1	0.6
W	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0	-0.1	-0.1	0.1	0.3	0.3	-0.1	-0.2	-0.1	-0.2	-0.2	-0.1	0	0.2
Y	-0.3	-0.1	0	0.1	-0.1	0.3	0	0.1	-0.3	-0.2	-0.3	0.1	0.1	-0.4	-0.2	-0.3	0.6	0.2	0.3	-0.1
D	0	0.4	0.3	0.1	0.2	0.3	0.5	0	-0.9	-0.5	0.2	0.6	-1.5	-0.3	0	0.7	1.5	0.1	-0.3	-0.3
E	0.3	0.6	-0.1	0.1	0.6	-0.4	-0.2	0.4	0.1	0.3	-0.2	-0.2	-0.1	0.1	0	0	-0.3	0.2	0.4	-0.6
K	-0.7	0.1	0.3	-0.6	-0.1	-0.2	-0.2	0.3	-0.2	0	-0.1	0.4	0.5	0.1	0.1	0.2	0	0.4	-0.4	-0.1
R	0.2	0.1	0.1	-0.1	-0.2	1	-0.1	0.3	-0.4	0.3	0.4	-0.1	0.3	-0.6	0.4	-0.2	-0.3	-0.4	-0.3	-0.1
H	-0.3	-0.2	0.3	-0.5	-0.1	-0.3	-0.1	-0.1	0.9	-0.7	0	-0.5	0	0.8	-0.4	0.3	0.4	-0.4	0.6	0
N	0	0.2	-0.1	0	0	0	-0.3	0	0.7	-0.1	0.1	0.1	-1	0.1	0.1	0.5	0.4	-0.8	0.3	-0.5
Q	0	0	-0.1	-0.4	0.2	0	0.1	0.1	-0.1	-0.9	-0.1	0.1	0.5	1	0.4	-0.3	0	-0.6	-0.3	0.7
S	0.3	-0.3	0.2	0.1	0	-0.2	-0.4	-0.7	0.8	-0.1	0.8	-0.5	-0.1	0.1	0.7	0.1	0	-0.4	-0.2	0
T	0.4	0.5	-0.8	-0.2	-0.5	-0.2	-0.1	0.1	0.7	0.6	0.4	-0.2	0	-0.2	0.1	0	-0.1	-0.1	0	-0.1
G	0.6	-0.1	0.3	-0.2	-0.1	-0.4	0.1	-0.1	0.2	0	-0.4	-0.3	-0.3	-0.1	0.1	0.6	0	0	0.2	0.2
P	0.5	-0.5	-0.2	1	0.5	0.9	-0.1	-0.2	-0.8	0.2	-0.1	-0.1	0.1	0	0	0.1	0	-0.5	0.3	-0.5
C	0	-0.1	-0.2	-0.2	-0.3	0.4	0	0.3	-0.1	-0.1	0.3	0	-0.1	0	-0.2	0.1	-0.3	0	-0.1	0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0011	0.3	-0.9	-0.6	-0.4	-0.5	-0.9	-1.4	-1	1.2	0.8	-0.1	0	-0.8	0.1	-0.1	0.6	0.2	0.3	1.7	-0.8
0013	0.3	-0.3	-0.4	0.5	0.3	-0.2	-1.9	-0.2	-0.1	0.2	0.3	0.2	0.1	0.9	0	1.2	1.3	0.4	-0.5	0

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0011_0013	1.423	1.00
0013_0015	0.924	0.88
0012_0013	0.689	0.59

See all coupling residues
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