May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 292-637 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [N:0254] and [Q:0305]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.9 -0.1 -0.1 0.4 0.2 -0.1 -0.1 -0.1 0 -0.1 0 -0.4 -0.1 -0.2 0.1 0.6 0.1 0 -0.1 0.1
F 0 0 0 0 0 0 0 0 -0.2 -0.1 0 0 0 0 -0.1 0.1 -0.1 0 0 0
I -0.1 0 0 0 0 0 0 0 0.1 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0
L 0.3 0 0 0.2 0 0 0 0 -0.2 -0.2 -0.1 -0.1 0 0 0.5 -0.3 0.2 -0.1 0 0
V 0.1 0 0 0 0 0 0 0 -0.1 -0.2 0.2 0 0 0 -0.1 -0.2 0.5 0 0 0
M 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0 0 0 0
W -0.1 0 0 0 0 0 0 0 -0.2 -0.1 0 0 0 0 -0.1 0.1 0.3 0 0 0
Y -0.1 0 0 0 0 0 0 0 -0.3 0.2 0 0 0 0 -0.1 0.5 -0.1 0 0 0
D 0.2 -0.1 -0.3 -0.3 -0.2 -0.1 -0.1 -0.3 0.4 0.1 -0.5 1.1 0.2 0 0.6 -0.4 -0.8 0 0.2 0
E -0.4 0 0.4 0.6 -0.1 0 0 0.3 0.6 -0.3 0.4 -0.2 -0.1 -0.1 -0.3 -0.2 0.1 -0.2 -0.1 -0.1
K -0.4 0 -0.1 -0.1 -0.1 0 0 -0.1 0.1 -0.7 -0.2 0.6 -0.1 0.2 -0.1 0.4 0.5 0.1 -0.1 -0.1
R 0.9 -0.1 -0.1 0.1 0.3 -0.1 -0.1 -0.1 -0.4 -0.2 -0.2 -0.2 -0.1 -0.1 -0.3 0.4 0.6 0 -0.1 -0.1
H -0.1 0 0 0 0 0 0 0 0.1 -0.2 0 0 0 0 -0.1 -0.2 -0.1 0 0 0
N 0 0 -0.1 -0.2 0.1 0 0 -0.1 0 1.1 0.1 -0.2 -0.1 -0.1 -0.6 0.1 0.3 -0.2 0.1 -0.1
Q -0.2 0 0.1 -0.1 -0.1 0 0 0 0.1 -0.2 -0.1 -0.1 0 0.4 -0.4 0.6 -0.1 -0.1 0 -0.1
S -0.2 -0.1 0.1 -0.3 -0.2 -0.1 -0.1 -0.2 0.2 1.2 0.5 0.1 -0.1 -0.2 0.4 -0.1 0.1 -0.3 -0.1 -0.2
T -0.4 0 -0.1 -0.1 -0.1 0 0 -0.1 0.3 0.5 0.1 -0.1 -0.1 -0.1 0.3 0.2 -0.4 0.3 -0.1 -0.1
G 0 0 -0.1 -0.1 -0.1 0 0 -0.1 0.6 0.4 -0.2 -0.1 0 -0.1 -0.1 -0.1 -0.1 0.3 0 0.3
P 0.1 0 -0.1 -0.1 -0.1 0 0 0.4 0.3 -0.4 0.2 -0.2 -0.1 -0.1 0.7 0.1 -0.5 -0.1 -0.1 0.3
C -0.1 0 0 0 0.4 0 0 0 -0.3 -0.2 -0.1 0 0 0.4 0.5 -0.2 -0.2 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0254 1.2 -1.1 -1 -0.4 -0.7 -1.2 -0.9 -0.8 1.3 0.6 0.6 0.5 -0.9 1 0.2 1.4 0.7 0.2 0.7 -0.6
0305 0.7 -1.1 -0.7 -0.3 -0.5 -1.1 -1.1 -0.8 1.4 1.2 0 -0.1 -1 -0.4 1 1.6 0.9 -0.1 -0.9 -0.6
Select residue pair below:
i_j Score Prob
0254_0305 0.790 0.34
Local Interactions:
i_j Score Prob
0304_0305 1.012 0.60
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...
Page generated in 0.0153 seconds.