OPENSEQ.org -1516272175- GREMLIN Submission

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Coupling matrix for [E:0248] and [C:0308]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	1	-0.1	0.6	0.2	0.3	-0.1	0	-0.2	-0.4	0.4	0.2	0.1	-0.1	-0.2	-0.2	-0.6	-0.4	0.6	-0.3	-0.1
F	0	0	0	0	-0.1	0	0	0	0	-0.1	0	0	0	0	0	-0.1	-0.1	0	0	0
I	0.5	0	0.2	-0.1	0.7	-0.1	0	-0.1	0.1	-0.2	-0.2	0.2	0	-0.1	0	0	-0.4	-0.1	-0.1	-0.1
L	-0.3	-0.1	0.3	-0.1	-0.3	-0.1	0	-0.1	0.1	0	0.5	0	-0.1	-0.1	-0.2	0.3	-0.1	-0.1	0.3	-0.1
V	0.5	-0.1	0.1	-0.2	-0.4	-0.1	0	-0.2	0	-0.4	-0.1	0.4	0.6	-0.2	-0.1	-0.1	-0.1	-0.2	0.5	-0.1
M	-0.1	0	-0.1	-0.1	-0.2	0	0	0.8	-0.2	-0.2	0.3	-0.1	-0.1	-0.1	-0.1	-0.2	0.4	-0.1	-0.1	0
W	0	0	0	0	-0.1	0	0	0	0	-0.1	0	0	0	0	0	-0.1	-0.1	0	0	0
Y	-0.1	0	0	0	0.3	0	0	0	-0.1	0.4	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.2	0	-0.1	0
D	-0.2	-0.1	0	0.2	0.2	-0.1	0	-0.2	-0.5	-0.5	0.2	0.7	0.2	-0.1	-0.3	0.6	0.1	-0.2	0.6	-0.1
E	0	-0.2	-0.1	-0.1	0.3	0.1	-0.1	-0.1	-0.7	-0.6	1	0.4	-0.1	-0.2	0	0.4	0.3	0	0.5	-0.1
K	-0.1	-0.1	-0.4	0.7	-0.2	-0.2	-0.1	-0.3	0.2	0.3	-0.3	0.3	0.4	0	0.6	-0.3	0.1	0.1	-0.4	-0.1
R	-0.2	-0.1	0.3	0.1	0.8	-0.1	-0.1	-0.2	-0.2	1.2	-0.5	-0.2	-0.2	-0.3	0.1	0.2	0.3	-0.2	-0.3	-0.2
H	0	-0.1	-0.2	-0.2	0.2	0.4	0	-0.1	0.2	0.5	-0.3	-0.3	-0.2	0.3	-0.2	0	0.5	-0.1	-0.2	-0.1
N	-0.3	-0.1	0.1	-0.2	-0.4	-0.1	0	-0.1	-0.4	0.4	-0.1	-0.3	0.3	-0.1	0.8	1.1	-0.1	-0.1	-0.2	0.3
Q	-0.2	0.3	0.4	0.1	-0.4	-0.1	-0.1	0.3	-0.1	-0.1	-0.2	-0.1	0.1	0.4	-0.3	0.2	0.3	0.2	-0.3	-0.1
S	0	0.1	-0.5	0	0.1	0.2	-0.1	0.2	0.2	0.1	0.1	-0.3	-0.4	0.3	0	0.4	0.1	-0.1	0	-0.3
T	-0.3	-0.1	-0.6	-0.3	0.1	0	-0.1	0.1	1.2	0.4	0.3	0.2	-0.4	-0.3	0.4	-0.5	0.3	-0.1	0.1	0
G	0.3	0	-0.1	-0.1	-0.2	0	0	0	-0.1	-0.3	0	-0.1	-0.1	0.4	-0.1	-0.2	-0.2	0	-0.1	0
P	0.1	0	-0.1	-0.1	-0.3	-0.1	0	-0.1	0.8	-0.5	-0.2	-0.2	-0.1	-0.1	-0.1	-0.3	-0.1	0.3	-0.1	0.8
C	-0.1	0.3	-0.1	0	-0.2	0	0	0.1	-0.1	0.1	-0.1	-0.1	-0.1	0.4	0.1	-0.2	-0.1	0	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0248	0.2	-1.3	0	-0.6	0.1	-0.6	-1.3	-1	0.5	1.2	0.9	0.5	0.1	0.2	0.9	1.2	1.3	-0.8	-0.1	-0.8
0308	0.6	-1	-0.2	-0.4	0.8	-0.9	-1.5	-0.5	0.4	1.5	0.4	0.3	-0.4	-0.2	0.1	1	1.2	-0.5	-0.2	-0.8

Select residue pair below:

i_j	Score	Prob
0248_0308	1.281	0.84
0248_0306	1.262	0.83
0248_0295	0.894	0.46

Local Interactions:

i_j

Score

Prob

See all coupling residues
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