May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

PRMT5 292-637 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [C:0245] and [L:0247]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0.2 -0.3 0.5 0.1 0.2 0.8 -0.3 0.2 0.1 -0.2 -0.2 0.2 -0.3 -0.2 0 0.1 -0.3 -0.1 0.6
F -0.1 0.1 -0.5 -0.8 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0.2 0.9 -0.1 -0.1 0.2 -0.1 0.8 0 -0.1
I 0.1 0.6 -0.1 0.5 -0.3 -0.2 -0.1 -0.2 -0.1 -0.1 -0.2 -0.2 0.1 -0.1 -0.1 0.5 0.2 -0.1 -0.1 -0.1
L -0.1 0.1 -0.2 0.5 -0.4 -0.1 0 -0.1 0 0 0.2 -0.1 -0.1 0 0.4 -0.1 -0.1 0 0 0
V -0.4 1 0 0.1 -0.7 -0.3 -0.2 0.1 -0.1 -0.2 -0.3 0.6 0.3 -0.2 -0.2 0 0.5 -0.1 -0.1 0.3
M -0.1 0 0 -0.2 0.4 0.4 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.2 0 0 0
W 0.3 0.1 -0.2 -0.4 -0.3 -0.1 -0.1 -0.1 0 0 -0.1 0.3 -0.1 0 0 -0.1 0.3 0 0 0
Y -0.1 0.1 0.1 -0.2 0.1 -0.1 0 -0.1 0 0 -0.1 -0.1 -0.1 0 0 0.3 -0.1 0 0 0
D 0.2 -0.4 0 0 -0.2 -0.1 -0.1 0.1 0 -0.1 0.9 -0.1 -0.1 0.1 0.2 -0.1 -0.2 -0.1 0 -0.1
E -0.4 -0.3 -0.1 -0.5 -0.7 0.4 0.3 -0.2 -0.1 0.2 0.3 0.7 0.4 -0.1 -0.1 0.1 0.2 0.7 -0.1 -0.1
K -0.4 0.4 0.8 1.2 0.4 0 -0.1 -0.2 -0.1 -0.1 0.1 -0.3 0 -0.2 -0.1 -0.3 -0.4 -0.1 -0.1 -0.1
R 0 0.4 0.4 0.4 0.2 0.2 -0.1 0.2 -0.1 -0.1 -0.2 -0.3 -0.3 -0.1 0.3 -0.3 0 -0.1 -0.1 -0.1
H -0.2 -0.5 0.8 -0.6 -0.3 0.4 -0.1 -0.1 0 0.4 -0.1 0.5 0.2 -0.1 -0.1 -0.2 -0.2 -0.1 0 0.4
N -0.2 -0.2 0.4 0 0.4 -0.1 -0.1 -0.1 0.4 0.2 0.1 -0.1 -0.2 -0.1 -0.1 -0.2 -0.2 -0.1 0 -0.1
Q 0.3 -0.4 0.1 0.3 0.2 -0.1 0 -0.1 0 0.4 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0 -0.1
S 0.2 0.7 -0.1 -1 0 0 -0.1 0.1 -0.2 -0.3 -0.1 -0.5 0.1 1.1 0.4 0.5 0.7 -0.3 -0.1 -0.3
T 0.2 -0.6 -0.1 0.5 0.8 -0.2 -0.1 0.4 -0.1 -0.1 -0.2 -0.4 -0.1 -0.2 -0.1 0.3 -0.1 -0.1 0.4 0
G 1 0.1 -0.4 0.3 -0.1 -0.2 -0.1 0.2 -0.1 -0.1 -0.2 0.1 -0.2 0.3 -0.1 -0.2 0 -0.1 0 -0.1
P -0.1 -0.2 -0.2 0.2 0.3 -0.1 0 -0.1 0 0 0.4 -0.1 -0.1 0 0 -0.1 -0.1 0 0 0
C 0.2 -0.6 0.3 1 0.4 -0.2 -0.1 0.6 -0.1 -0.1 -0.1 0.1 -0.3 -0.1 -0.1 -0.2 -0.3 -0.1 0 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0245 1.2 -0.2 0.1 -0.8 0.7 -0.5 -0.8 -0.9 -0.4 0.5 0.3 0.5 -0.1 -0.4 -0.2 1.3 0.7 0.1 -0.8 0.2
0247 0.3 1.1 1.3 1.8 1.2 -0.2 -0.7 -0.1 -0.9 -0.5 -0.3 0.1 0.3 -0.7 -0.5 0.1 0.3 -0.6 -1.1 -0.6
Select residue pair below:
i_j Score Prob
Local Interactions:
i_j Score Prob
0245_0247 1.101 0.70
0244_0245 0.877 0.44
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...

Page generated in 0.0163 seconds.