May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 292-637 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [C:0227] and [F:0311]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.1 -0.1 0.1 0.6 1.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.4
F 0.6 -0.4 -0.3 -0.1 0.1 -0.2 -0.1 0 0 0 0 0 0 -0.1 -0.1 0.2 -0.1 0.6 0.4 0.1
I 0.2 0.5 0.2 -0.2 0.3 0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.2 0.2 -0.1 0.1
L -0.2 1.2 0 -0.3 0.2 -0.1 0.5 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.2 0.1 -0.1 -0.2 1.2
V 0 0.4 0.4 -0.3 0.5 0.3 0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 0.2 -0.2 0.1 -0.3 -0.2 0.1
M -0.1 -0.3 0.5 -0.1 -0.2 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
W 0.3 -0.2 -0.3 0.6 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
Y 0 -0.2 -0.2 0.2 0.3 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0.4 -0.2 -0.3 0 0.3 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
R 0 -0.1 -0.1 0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.1 0.3 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 -0.1 -0.2 0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 -0.2 -0.2 0.1 -0.1 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
T -0.1 0.1 0.5 -0.2 -0.3 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
G 0 -0.1 -0.2 0.3 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.5 0.4 1.2 0.6 0.2 -0.2 -0.2 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0227 1.4 1.2 1.7 2.3 2.2 0 -0.4 -0.7 -1.1 -0.9 -0.5 -0.9 -1.1 -0.9 -0.9 -0.5 0 -0.9 -1.1 1.3
0311 0.7 0.5 1.8 1.9 1.2 0.7 -0.5 -0.7 -0.9 -0.9 -0.9 -0.9 -0.9 -0.7 -0.7 -0.6 -0.5 -0.3 -0.7 0.3
Select residue pair below:
i_j Score Prob
0123_0311 1.030 0.62
0298_0311 0.861 0.42
0227_0311 0.801 0.36
Local Interactions:
i_j Score Prob
0309_0311 0.829 0.39
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...
Page generated in 0.0144 seconds.