May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

PRMT5 292-637 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [K:0167] and [D:0169]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0.1 -0.1 -0.1 -0.1 -0.1 0.3 0.2 0.6 -0.4 -0.4 -0.1 0.5 0.5 -0.1 -0.5 -0.6 1.1 -0.1 -0.1
F 0 0 0 0 0 0 0 0 -0.1 0 0.4 0 -0.1 -0.1 0 0.1 0 -0.2 0 0
I 0 0 0 0 0 0 0 0 0.1 -0.1 -0.1 0.4 -0.1 -0.1 0 -0.1 0.4 -0.4 0 0
L 0.2 0.4 -0.1 -0.1 -0.3 0.2 -0.1 1 -0.5 0.5 0 -0.2 0.1 -0.7 -0.2 -0.3 0.4 0.1 -0.1 0.2
V 0.3 -0.1 0 0 -0.1 0 0 0 -0.6 -0.2 0.1 -0.2 -0.4 0.6 -0.1 0.1 0 0.7 -0.1 0
M 0 0 0 0 0 0 0 0 0.2 0 0 0 0 -0.1 0 0 0 -0.2 0 0
W 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 0 0
Y 0 0 0 0 0 0 0 0 -0.1 0 0.1 0 0 -0.1 0 0 0 -0.1 0 0
D -0.1 -0.1 0 0.4 -0.1 0.3 0 -0.1 -0.4 -0.2 0.1 0.4 -0.1 0.5 -0.1 -0.3 0.2 -0.4 -0.1 0
E 0 0 0 0 0 0 0 0 0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 -0.1 0.4 -0.4 0 0
K -0.2 -0.3 -0.2 -0.3 -0.2 -0.2 -0.2 -0.3 1.1 0.6 -0.5 -0.7 -0.8 0.3 -0.2 0.6 0.6 0.4 0.3 -0.2
R -0.2 -0.1 -0.1 -0.1 0.1 0.1 -0.1 -0.2 0.5 -0.1 0.4 0.1 -0.2 -0.2 -0.2 -0.3 0.2 0.7 -0.1 -0.1
H -0.1 -0.1 0 0 0.4 -0.1 0 -0.1 -0.2 -0.1 0.3 0.8 0.5 0 0.3 -0.3 -0.2 -0.7 0 0
N -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.4 -0.2 0.3 -0.3 1.3 -0.3 -0.1 0 -0.2 0.4 0.3 -0.1
Q -0.1 -0.1 0 -0.1 -0.1 -0.1 0 -0.1 0 0.2 -0.2 -0.2 -0.3 0.4 0.3 0 -0.3 0.3 -0.1 0
S 0.5 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.4 0 0.4 -0.3 0 0 0.4 0.6 0.1 -0.5 0.3 -0.1
T -0.2 -0.1 -0.1 0.3 0.3 -0.1 -0.1 -0.1 0.7 0.4 -0.5 0.5 -0.3 -0.2 0.2 0 -0.3 -0.2 -0.1 -0.1
G -0.1 0 0.6 0 0 0 0 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 -0.3 -0.1 -0.2 -0.2 0 0 0.2
P 0 0 0 0 0 0 0 0 -0.2 -0.1 0.3 -0.1 0.3 -0.2 0 0.3 0.1 -0.3 0 0
C 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0167 0.8 -0.7 -0.5 0.9 0.1 -0.8 -1 -0.9 0.5 -0.1 0.5 0.5 0 0.1 0.3 0.8 0.7 -0.1 -0.3 -1
0169 -0.3 -0.6 -0.6 -0.5 -0.5 -0.4 -0.8 -0.1 0.7 0 0.6 0.3 0 0.9 -0.1 0.2 0.6 0.2 0 -0.7
Select residue pair below:
i_j Score Prob
0169_0251 0.878 0.44
0169_0301 0.863 0.43
0169_0299 0.846 0.41
0169_0270 0.817 0.37
Local Interactions:
i_j Score Prob
0167_0169 1.207 0.79
0169_0170 1.079 0.67
0168_0169 0.908 0.48
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...

Page generated in 0.0306 seconds.