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PRMT5 292-637 Return to Main Page
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Coupling matrix for [I:0140] and [V:0171]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.1 -0.3 -0.2 -0.4 -0.1 0 0 0 0.4 -0.2 1 0 -0.1 0.4 0 -0.1 0 0 0
F -0.1 -0.1 -0.4 -0.1 0 0 0 0 0 -0.1 -0.1 -0.2 0.5 0 0 0.4 0.3 0 0 0
I -0.6 -0.3 1.8 1.1 0.7 -0.2 -0.2 -0.2 -0.3 0.5 0.5 -0.6 -0.3 0 -0.2 -0.1 -0.3 -0.2 -0.4 -0.4
L 0.7 -0.1 0.5 -0.2 -0.3 0.6 -0.2 -0.2 -0.3 -0.2 0.4 0.7 0.4 -0.3 0.2 -0.4 0 -0.2 0 0.2
V 0.2 -0.4 0.3 0.4 0.5 -0.1 -0.1 0.1 0.3 -0.5 0.1 0.4 -0.5 -0.3 0.1 0.5 0 -0.1 -0.4 0.2
M -0.1 -0.1 -0.2 0.6 0.5 -0.1 0 0 0 -0.1 0.2 -0.3 -0.1 -0.1 -0.1 -0.1 -0.2 0 0.4 -0.1
W -0.1 0 -0.1 -0.1 -0.2 0 0 0 0 0 0.1 -0.1 0 0.7 0 0 -0.1 0 0 0
Y 0.4 0 -0.1 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0
D 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0.4 0 0 0
R 0 0 -0.1 -0.1 0.3 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0
H 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 -0.1 -0.1 0.3 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0
S 0 0 -0.1 -0.1 0.3 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0
T -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0.8 0 0 0
G -0.1 1.2 -0.2 -0.2 -0.2 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 0 0 0
P 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0.4 0 0.2 0.3 -0.2 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0140 0.1 0 1.1 2.1 1 0.3 -0.2 -0.3 -0.6 -0.6 -0.2 -0.3 -0.6 -0.6 -0.3 -0.4 -0.2 0 -0.6 0.1
0171 0.6 -0.1 1.2 1.3 1.7 -0.2 -1.1 -0.9 -0.8 -0.3 0.7 1.2 -0.3 -0.6 0 0 0.7 -1.1 -0.8 -0.5
Select residue pair below:
i_j Score Prob
0140_0171 1.285 0.85
0053_0171 1.135 0.73
Local Interactions:
i_j Score Prob
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...
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