May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 292-637 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0133] and [H:0164]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 -0.1 0.2 -0.1 -0.1 0 -0.2 0.3 -0.2 0 0 -0.1 -0.2 0.7 0.7 0.2 -0.1 -0.2 -0.1
F -0.1 0 0 -0.1 0 0 0 0 -0.1 -0.1 -0.3 0.4 -0.2 -0.2 0.6 -0.1 0 0 0 0
I -0.2 0 0 0.4 0.4 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 0.2 -0.1 -0.1 0 -0.1 0
L 0.1 0 0 0.4 -0.1 -0.1 0 -0.1 -0.1 0.3 0 -0.8 0.2 0.3 0.2 -0.1 -0.1 0 -0.1 0
V 0.6 -0.1 0 -0.1 -0.1 0.1 0 -0.1 -0.2 0 0.2 0.1 0.3 0.1 -0.3 -0.2 0.2 -0.1 -0.1 -0.1
M -0.1 0 0 0 0 0 0 0 0.4 -0.1 -0.2 -0.4 0.1 0.2 -0.1 -0.1 0 0 0 0
W -0.1 0 0 0 0 0 0 0 0 0 -0.2 -0.2 -0.3 0.8 -0.1 0 0 0 0 0
Y -0.1 0 0 0 0 0 0 0 0 0 -0.2 -0.2 -0.2 -0.1 0.4 0 0 0 0 0
D 0.3 -0.1 -0.1 -0.2 0.3 0 -0.1 0.1 -0.3 0.1 0.7 0.5 0.1 0.1 -0.1 -0.3 -0.3 -0.1 -0.2 0.3
E -0.4 -0.1 -0.1 -0.2 -0.2 -0.2 0 -0.1 -0.3 0.1 1.2 1.3 0 -0.1 0.1 -0.3 0.2 -0.1 -0.2 -0.1
K 0 -0.1 -0.1 -0.4 0.1 -0.2 -0.1 0.1 0 0.5 -0.1 -0.2 0.7 0.4 -0.1 0.7 -0.4 -0.2 0 -0.1
R 0.3 0.4 -0.1 -0.1 -0.1 0.3 0 -0.1 0 -0.2 -0.5 -0.3 0.6 -0.2 -0.3 -0.2 0 0.3 0.1 -0.1
H 0 0.4 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.2 0.3 -0.3 0.2 0.2 -0.1 -0.1 0 -0.1 0
N -0.4 -0.1 -0.1 0.2 -0.1 0.7 0 0.2 0.1 -0.2 0.5 0.3 -0.6 -0.1 -0.4 0.1 -0.2 0.3 0.5 -0.1
Q 0.2 -0.1 -0.1 0.2 -0.1 -0.1 0 0.3 -0.2 -0.2 0 1 -0.5 0.4 -0.3 -0.2 0.4 -0.1 -0.2 -0.1
S 0.5 -0.1 -0.1 -0.2 -0.2 -0.2 -0.1 0 0.4 0.1 0.2 0.1 0.1 -0.3 -0.1 0.4 0.1 -0.1 -0.2 0.3
T 0 -0.1 -0.1 0.1 -0.1 -0.1 0 0.2 -0.1 0.1 0.5 0.2 0.2 -0.5 0.1 -0.2 0.2 -0.1 -0.2 -0.1
G 0 0 0 0 0.4 0 0 -0.1 -0.1 -0.1 0.1 -0.3 0.3 0 -0.1 -0.1 -0.1 0 -0.1 0
P -0.3 0 0 -0.1 -0.1 -0.1 0 -0.1 0.5 0.4 -0.4 -0.4 -0.2 -0.3 -0.2 0.1 0.1 0.1 0.9 0
C -0.1 0 0 0 0 0 0 0 0 0 -0.2 0 0.1 -0.1 -0.1 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0133 0.7 -0.7 -0.4 -0.2 0.1 -0.9 -0.9 -1.2 1.1 0.8 1.4 0.5 -0.3 0.8 0.5 0.9 0.5 -0.6 0 -1.2
0164 0.5 -0.7 -0.8 -0.2 -0.5 -0.5 -1 -0.3 -0.1 0.1 1.4 2 0.7 0.7 0.6 -0.1 0 -0.7 -0.3 -0.6
Select residue pair below:
i_j Score Prob
0161_0164 1.897 0.99
0133_0164 0.947 0.53
0131_0164 0.870 0.43
Local Interactions:
i_j Score Prob
0164_0165 1.402 0.90
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...
Page generated in 0.0162 seconds.