OPENSEQ.org -1516272175- GREMLIN Submission

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PRMT5 292-637

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Coupling matrix for [N:0112] and [E:0116]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	-0.1	-0.1	0.1	-0.1	-0.1	0	-0.1	0.8	1	0	-0.3	0.1	0	-0.2	-0.3	-0.4	-0.1	-0.1	-0.1
F	-0.2	0	0.4	-0.2	-0.1	-0.1	0	0.4	-0.2	0.2	-0.2	0.5	0.2	-0.6	-0.1	-0.1	-0.2	0	-0.1	-0.1
I	-0.3	-0.1	-0.1	-0.2	-0.1	-0.1	0	-0.1	-0.3	-0.5	-0.2	-0.2	0.1	2	-0.1	0.6	-0.2	-0.1	-0.3	0.4
L	-0.3	-0.1	-0.1	-0.3	-0.1	-0.1	0.1	0.3	0	-0.1	-0.3	0.2	-0.3	1.1	0.2	-0.2	0.1	0.4	0	-0.1
V	0.3	-0.1	-0.1	-0.2	-0.1	-0.1	0	-0.1	-0.3	-0.2	-0.2	-0.2	0.1	1.8	-0.1	0.2	-0.3	-0.1	0.3	-0.1
M	0.3	0	0	-0.1	0	0	0	0	-0.1	-0.2	-0.1	-0.1	-0.1	0.2	0.1	-0.1	-0.1	0	-0.1	0
W	-0.1	0	0	-0.1	0	0	0	0	-0.2	-0.2	-0.1	-0.1	-0.1	-0.5	-0.1	-0.1	-0.1	0	1.5	0
Y	-0.2	-0.1	-0.1	-0.2	-0.1	0.1	0	-0.1	-0.3	-0.5	0.2	0.4	0.9	-0.4	-0.1	0.2	0.6	0	-0.3	-0.1
D	-0.3	-0.1	-0.1	-0.3	0.3	-0.1	0	-0.1	-0.4	-0.7	1.2	-0.1	0.6	-0.4	-0.2	0.4	-0.3	-0.1	0.2	-0.1
E	0.1	-0.1	0.6	1.3	0.1	-0.2	-0.1	-0.2	-0.4	-0.6	0.4	-0.3	-0.1	-0.2	-0.1	0.2	0.6	-0.1	-0.3	-0.1
K	0.1	-0.1	-0.1	0.3	-0.1	-0.1	-0.1	-0.1	1.5	1.1	0	-0.3	-0.3	-0.1	-0.2	-0.3	-0.4	-0.1	0.2	-0.1
R	0.5	-0.2	0.1	0.5	0.1	0.2	-0.1	0.1	-0.6	-0.8	-0.1	0.2	-0.1	-0.5	0.3	-0.5	0.6	0.3	-0.2	-0.2
H	-0.2	0.4	-0.1	-0.1	-0.1	-0.1	-0.1	0.3	-0.2	0	0.4	-0.1	-0.3	-0.7	-0.2	0.7	1.2	-0.1	-0.5	-0.1
N	-0.5	-0.1	-0.2	-0.4	0.3	0.3	-0.1	-0.2	0.4	1.2	-0.4	-0.3	-0.1	0.4	0.3	0	-0.1	-0.1	0.2	0.3
Q	0.3	0.4	-0.1	0	-0.1	0.3	-0.1	-0.1	0.5	-0.4	0	0.1	-0.3	-0.1	0.2	-0.2	0	-0.1	-0.5	0.3
S	0.4	-0.1	-0.1	-0.2	-0.1	-0.1	0	-0.1	0	1.1	-0.1	-0.2	0.1	-0.5	-0.1	-0.3	0	-0.1	0.5	-0.1
T	-0.2	0	-0.1	0.1	0	0	0	-0.1	-0.2	0.6	0	-0.1	0.1	0.6	-0.1	-0.1	-0.2	0	-0.2	0
G	0.2	-0.1	-0.1	0.2	-0.1	-0.1	0	-0.1	0.7	-0.4	-0.2	0.7	-0.1	-0.8	0.3	-0.2	-0.3	-0.1	0.5	-0.1
P	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0	-0.3	0	0	0	0	-0.1	0
C	-0.1	0	0	-0.1	0	0	0	0	-0.1	0.4	-0.1	-0.1	-0.1	0.3	-0.1	0.3	-0.1	0	-0.2	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0112	0.4	-0.4	0.3	0.3	0.4	-1	-0.9	-0.2	0.3	0.8	0.5	1.3	0.4	0.9	0.4	0.2	-0.4	-0.2	-1.5	-0.7
0116	0.3	-0.9	-0.7	0.1	-0.7	-0.6	-1.1	-0.6	0.8	1.1	0.2	0.1	0.3	1.8	-0.3	0.3	0.5	-0.9	0.8	-0.7

Select residue pair below:

i_j	Score	Prob
0060_0116	0.980	0.56
0082_0116	0.848	0.41
0112_0116	0.793	0.35

Local Interactions:

i_j

Score

Prob

See all coupling residues
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