May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

PRMT5 292-637 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [K:0102] and [Y:0177]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 -0.3 -0.2 -0.3 -0.5 -0.2 0.6 -0.3 0.2 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 -0.3 0.4 1 -0.1 -0.1
F -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.1 -0.1 0.2 -0.1 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0.4 0.1 -0.1 0 -0.1
L 0.4 -0.1 -0.2 0.2 0.3 -0.1 0 -0.1 0.2 0 0 0 0 0 0 -0.3 0.3 -0.3 0 -0.2
V 0.3 -0.1 0.2 -0.1 0.5 -0.1 -0.1 -0.1 -0.1 0 -0.1 0 0 0 0 0 -0.1 0.1 0.4 -0.2
M 0.3 -0.1 0.2 0.2 0.5 -0.1 -0.1 -0.2 -0.1 0 -0.1 0 0 0 0 0.1 -0.2 -0.6 -0.1 0.4
W -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0.3 -0.1 -0.1 -0.1 -0.1 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0.4 -0.2 0 0.2
D -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0.3 -0.1 0.2 0.2 -0.2 0 0 0.2 -0.1 0 0 0 0 0 0 -0.2 -0.1 0.1 0 -0.1
K -0.4 0.1 0.7 -0.4 0.2 -0.2 -0.3 1.5 -0.2 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.3 -0.3 -0.1 0.6
R -0.1 0.3 -0.2 0.8 0.8 -0.1 -0.1 -0.3 -0.2 0 0 0 0 0 0 0.4 -0.2 -0.4 -0.1 -0.1
H -0.7 1.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0.3 -0.1 -0.1 0 -0.2
N -0.6 -0.1 0.2 0.2 -0.3 0.3 0 -0.1 -0.1 0 0 0 0 0 0 0.1 0.2 0.5 0 -0.2
Q -0.5 -0.1 0.2 -0.1 -0.3 0.3 0 -0.1 -0.1 0 -0.1 0 0 0 0 0.1 -0.1 0.4 -0.1 0.6
S 0.5 -0.1 -0.2 0.2 0.2 0.3 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 -0.1 -0.2 -0.1 0.4
T -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0.1 0.3 -0.1 0 0.3
G 0 -0.1 -0.2 -0.1 0.5 -0.1 0 0.2 -0.1 0 -0.1 0 0 0 0 0 -0.1 0.5 0 -0.2
P 0.6 -0.1 -0.2 -0.1 -0.2 -0.1 0 -0.1 0.8 0 0 0 0 0 0 -0.2 -0.1 0.1 0 -0.2
C 0.9 -0.1 -0.1 -0.1 -0.2 -0.1 0 0 -0.1 0 0 0 0 0 0 0.4 -0.1 0.2 0 -0.5

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0102 0.7 -0.7 -0.3 0 0.5 0 -0.7 -0.1 -0.7 0.2 0.9 0.4 -0.2 0 0.3 0.5 0 0 0.1 -0.2
0177 1.6 0 0.5 0.4 1.2 -0.3 -0.4 0.1 -0.1 -0.8 -0.6 -0.8 -0.6 -0.8 -0.8 0.8 0.4 0.5 -0.6 0.8
Select residue pair below:
i_j Score Prob
0150_0177 1.902 0.99
0177_0232 1.137 0.73
0155_0177 0.902 0.47
0102_0177 0.830 0.39
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...

Page generated in 0.2778 seconds.