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Coupling matrix for [Y:0098] and [V:0125]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.7 -0.2 0.3 -0.4 0 0 0.3 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0
F -0.1 0.2 1.1 0.1 -0.2 -0.1 -0.1 -0.3 -0.1 0.2 -0.1 -0.1 -0.2 0 -0.1 0.3 -0.2 0 0 0
I 0.1 -0.4 0.1 0.4 0.9 0.1 0.2 0.4 -0.1 -0.2 -0.1 0.2 -0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
L 0 0.1 0.4 0.1 -0.4 -0.1 0 -0.1 0 -0.1 0 -0.1 -0.1 0 0 0 0.4 0 0 0
V -0.1 0.2 0 0.3 0.7 -0.2 -0.1 0.1 -0.1 -0.2 -0.1 0.4 -0.3 0 0.3 -0.1 -0.2 -0.1 0 0
M 0 -0.1 0.1 -0.2 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0.3 -0.2 -0.2 -0.1 0.7 -0.1 -0.2 -0.1 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 0 0
Y -0.2 0.2 0.8 0.7 0.1 0.5 -0.3 -0.2 -0.3 0.5 0.1 -0.1 -0.3 -0.1 -0.4 -0.2 -0.4 0.1 -0.1 -0.1
D 0 0.4 -0.2 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 -0.1 0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0.3 0 0 0 0 0 0 0
H -0.1 -0.4 -0.3 -0.6 -0.6 -0.1 -0.1 0.1 0.4 -0.1 -0.1 -0.1 1.4 0 0.4 0 0.7 0 0 0
N 0 0 -0.1 0.1 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 -0.1 0 -0.1 0.1 0 0 0 0 0 0 0 0 0 0 0.1 0 0 0 0
T -0.1 -0.2 0 0.4 0 0.1 0.5 0.3 -0.1 -0.1 0.2 0.1 0 0 -0.1 -0.1 -0.1 -0.1 0 0
G 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0.3 -0.3 -0.2 0.2 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0098 0.4 0.7 1 0.1 1.3 -0.3 -0.2 0.3 -0.3 -0.6 -0.5 -0.4 0.7 -0.5 -0.6 -0.2 1 -0.6 -0.6 0
0125 -0.3 0.8 1.2 1.2 1.1 0 -0.3 0.7 -0.4 -0.5 -0.3 0.1 0.2 -0.6 -0.3 -0.4 -0.3 -0.4 -0.6 -0.6
Select residue pair below:
i_j Score Prob
0098_0125 1.505 0.94
0125_0299 1.066 0.66
0125_0132 1.022 0.61
0096_0125 1.004 0.59
0100_0125 0.939 0.52
0085_0125 0.856 0.42
0125_0189 0.822 0.38
Local Interactions:
i_j Score Prob
0125_0127 0.853 0.41
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...
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