May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 292-637 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0072] and [S:0287]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 0 0 0
F 0 0 0.3 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0
I 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0.6 0 -0.1 0.4 0
L 0 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0.3 0 0.1 0.3 0 0 0
V -0.1 0 -0.1 0.5 -0.1 0 0.3 0.1 0 0 -0.1 0.3 0 -0.1 -0.1 0.1 -0.1 0 -0.1 -0.1
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 0 0 0
D 0.3 -0.1 0.1 -0.3 0.2 -0.1 -0.1 0.1 0.2 -0.1 0 -0.1 1.1 -0.5 -0.8 -0.1 0.1 0 -0.3 0.6
E -0.3 -0.1 0.2 -0.1 0 0 0 -0.1 -0.1 0 0 -0.1 0.1 -0.1 1 0.2 -0.3 0.1 -0.1 -0.3
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 0 0 0
H 0.2 -0.1 -0.1 -0.1 0 0 0 0 -0.1 0 0 0 -0.2 0.1 -0.1 0 -0.1 0.3 0.4 -0.1
N 0.1 0 -0.1 0 0 0 0 0 0 0 0 0 -0.2 0.4 0 0 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
S 0 0 0 0.3 0 0 0 0 0 0 0 0 -0.1 0 0 -0.2 0 0 0 0
T 0 0.3 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
C 0.2 0 0 0 0 0 0 0 0.3 0 0 0 -0.1 0 0 -0.2 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0072 -0.1 -0.1 0.7 0.5 0.7 -0.1 -0.3 -0.1 0 0.1 -0.3 -0.1 0.2 0.1 -0.3 -0.1 0 -0.3 -0.3 0
0287 0.4 0.2 0.2 0.1 -0.1 -0.4 -0.1 0 0.3 -0.4 -0.2 -0.1 0 0.1 -0.2 0.6 -0.1 0.1 0.2 -0.3
Select residue pair below:
i_j Score Prob
0072_0287 1.331 0.87
0287_0294 0.969 0.55
0036_0287 0.962 0.54
0287_0290 0.951 0.53
0148_0287 0.942 0.52
0268_0287 0.931 0.51
0158_0287 0.930 0.51
0155_0287 0.852 0.41
0130_0287 0.787 0.34
Local Interactions:
i_j Score Prob
0287_0289 1.181 0.77
0287_0288 1.043 0.64
0285_0287 1.026 0.62
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...
Page generated in 0.0187 seconds.