May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 292-637 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0060] and [E:0061]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.1 0 -0.2 0.3 0.1 0 0.1 -0.2 0 0 -0.1 -0.1 0.1 -0.1 0.1 -0.1 0.5 -0.1 -0.1
F -0.1 0 0 0 0 0 0 0 -0.1 0.3 -0.1 0 0 0.3 0 -0.1 -0.1 -0.1 0 0
I 0.3 0 0 -0.1 0.3 -0.1 0 0 0.3 -0.2 0.3 -0.1 0 -0.1 0 -0.1 0.3 -0.2 0 0
L -0.3 -0.1 -0.1 -0.2 0.1 -0.1 -0.1 -0.1 0.2 0.3 0.3 -0.3 -0.1 0.3 0.3 -0.1 -0.2 0.2 0.2 -0.1
V 0.2 0 0 -0.1 0.4 0 0 0 -0.1 -0.3 -0.1 -0.1 0 -0.1 -0.1 0.4 -0.1 0.1 -0.1 0
M 0.3 0 0 0 0 0 0 0 -0.1 -0.1 0.2 -0.1 0 -0.1 0 -0.1 0 -0.1 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
Y -0.1 0 0.3 -0.1 -0.1 0.3 0 0 0.2 -0.1 -0.2 0.2 -0.1 -0.1 0.4 -0.2 -0.1 0 -0.1 0
D -0.2 -0.1 0.1 -0.2 0.4 0.3 0.2 -0.1 0 0.3 -0.3 -0.1 0.2 -0.1 0 -0.1 -0.1 0 -0.2 -0.1
E 0.4 0.1 -0.1 -0.1 0.1 -0.2 -0.1 -0.1 0.3 0.4 0.4 0.1 -0.2 0.3 -0.1 0.1 -0.2 -0.1 -0.2 -0.1
K 0.1 0.1 0 0.5 -0.4 0 -0.1 -0.2 0.2 0 0.2 0.4 0.2 0.1 -0.1 -0.5 0.5 0 -0.3 0.3
R 0.2 0.2 -0.1 0.1 -0.2 -0.1 -0.1 -0.1 0 -0.3 0.1 0.5 0.2 -0.1 -0.1 0.1 0 -0.1 -0.2 -0.1
H -0.2 0 0 0.3 -0.1 -0.1 0 0.1 0 -0.2 -0.2 -0.1 0.1 0.1 -0.1 0.4 -0.1 0.2 -0.1 0
N 0.1 0.4 0 1 -0.1 -0.1 -0.1 -0.1 -0.2 0.2 -0.3 -0.2 -0.1 0.1 -0.1 0.1 -0.1 0 -0.1 0
Q -0.2 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 0.4 -0.2 -0.1 0 0.4 -0.1 -0.2 0.1 -0.1 -0.1 0 0.8 -0.1
S -0.1 -0.1 0 0.3 -0.2 -0.1 0.3 -0.1 -0.2 0.1 -0.4 -0.1 -0.1 0.1 -0.2 0.3 0.1 0 0.1 0.2
T 0 -0.1 -0.1 -0.2 0.3 0.3 0 -0.1 -0.2 -0.2 0.1 0.1 0.1 0 -0.1 0.1 0 -0.3 -0.1 -0.1
G 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.5 -0.2 0.5 -0.2 -0.1 0.1 0.3 -0.3 -0.1 0.1 0.3 -0.1
P -0.1 -0.1 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0.5 0 -0.1 -0.1 -0.2 -0.1 -0.1 0.3 0.8 -0.1 0
C -0.1 0 0 0 0 0 0 0.4 -0.1 0 -0.1 0 0 -0.1 0 -0.1 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0060 0 -0.6 -0.3 0.5 -0.2 -0.5 -0.8 -0.1 0.2 0.7 0.8 0.4 -0.1 0 0.1 0.5 0.1 0.4 -0.1 -0.7
0061 0.7 -0.5 -0.5 0.1 -0.1 -0.2 -0.5 -0.5 0.1 0.4 0.3 0.3 -0.6 0.7 -0.2 0.7 0 0.7 0 -0.5
Select residue pair below:
i_j Score Prob
0061_0065 0.831 0.39
0007_0061 0.822 0.38
0061_0333 0.772 0.33
0009_0061 0.769 0.32
Local Interactions:
i_j Score Prob
0059_0061 1.188 0.78
0061_0062 1.124 0.72
0060_0061 0.827 0.39
0061_0063 0.826 0.38
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...
Page generated in 0.1236 seconds.