May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 292-637 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0008] and [V:0330]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 -0.1 -0.2 0.4 0.1 0 -0.1 0.1 0.1 -0.1 -0.1 0.3 -0.1 -0.2 -0.1 0.6 -0.1 0 0
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0.1 0 -0.1 -0.1 0.2 -0.1 0 0 0 -0.1 -0.1 0 0 -0.1 -0.1 0.2 -0.1 0.2 0 0
L -0.1 -0.1 -0.2 -0.2 0 -0.1 0 -0.1 0.3 0.1 0.4 -0.1 0.4 0 -0.2 -0.1 0.1 -0.1 0 -0.1
V -0.1 0 -0.1 -0.1 -0.1 0 0 0 -0.1 -0.1 0.3 -0.1 0 -0.1 0.2 0.2 0.1 -0.1 0 0
M -0.1 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 0 -0.1 0 -0.1 0 -0.1 0.2 0.2 -0.1 -0.1 0 0.3
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.1 0.2 0.2 -0.1 0 0 0 -0.1 0 -0.1 0 -0.1 0.1 -0.1 0 0 0 0.4
D 0 0 -0.1 0 -0.1 0 0 0.3 0.2 -0.1 0 0.2 0 -0.1 -0.1 -0.1 -0.1 0 0 0
E -0.2 -0.1 -0.2 0.2 -0.3 -0.1 0 -0.1 -0.1 0.2 -0.1 0.4 0.1 -0.2 0.3 0.1 0.2 -0.1 0.3 -0.1
K -0.1 -0.1 0 0.3 -0.2 0 0 0.2 0.5 0.1 0 -0.2 -0.1 0 0.3 -0.2 0.2 0.1 -0.1 -0.1
R 0.3 0 0.8 -0.1 0.5 -0.2 0 -0.1 -0.2 0.2 -0.1 -0.1 -0.2 -0.1 0.1 -0.1 -0.3 0 -0.1 -0.1
H 0 0.3 -0.1 -0.1 -0.2 0 0 -0.1 0 0.2 0 -0.1 0 0 -0.1 0.1 -0.2 0.2 0 0
N -0.1 0 -0.1 0 0 -0.1 0 0 -0.1 -0.1 -0.1 0.3 0 -0.1 -0.1 -0.1 0.5 -0.1 0 0
Q 0.2 0.1 0.1 0.1 -0.1 0.2 0 0.2 -0.1 -0.3 -0.1 0.2 -0.2 -0.2 0.1 -0.3 -0.1 0 -0.1 -0.1
S -0.1 0 -0.2 0.2 0.4 0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 0.1 0 -0.1 0 0 -0.1
T 0.2 0 0.5 0.3 0.1 -0.2 0 -0.1 -0.1 -0.1 0 -0.1 0 -0.1 -0.1 0.2 -0.1 -0.1 0 -0.1
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0.3 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
C 0.1 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0.3 0 -0.1 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0008 0.2 -0.5 0 0.3 0 -0.3 -0.6 0 0.1 0.5 0.3 0.5 0.1 -0.1 0.3 0.2 0.2 -0.4 -0.5 -0.5
0330 0.2 -0.2 0.2 0.3 0.6 -0.2 -0.7 -0.4 0.1 0.1 0 -0.1 -0.2 -0.1 0.4 0.2 0.4 0.1 -0.5 -0.4
Select residue pair below:
i_j Score Prob
0008_0330 0.889 0.46
0006_0330 0.883 0.45
0011_0330 0.856 0.42
0330_0333 0.841 0.40
0094_0330 0.831 0.39
0007_0330 0.792 0.35
0327_0330 0.769 0.32
Local Interactions:
i_j Score Prob
0330_0331 1.225 0.80
0329_0330 1.116 0.71
0328_0330 0.985 0.57
0330_0332 0.887 0.45
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: P P P N A ...
Page generated in 0.0244 seconds.