May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [N:0087] and [P:0313]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.6 -0.1 0.1 0.2 0.3 -0.1 -0.1 0 0 -0.1 0.2 0 -0.1 0 -0.1 -0.1 0 -0.4 0.1
F 0.3 0.2 -0.1 0 -0.1 0.4 -0.1 0 0 0 0 0 0 0 0 0 0.3 0 -0.2 -0.1
I 0 -0.2 0.5 0.5 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 0
L -0.1 -0.1 0.2 0 0.5 -0.1 0 0.3 0 0 0 0 0 0 0 0 0 0 -0.4 0
V -0.1 0.1 0.5 0 0.5 -0.1 0 0 0 0 0 0 0 0 0 0 0.2 0 -0.7 0.2
M -0.1 0.2 -0.2 -0.1 -0.1 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0.4 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
Y -0.1 -0.1 0.1 -0.1 -0.1 0 -0.1 0 0 0 0.3 0 0 0 0 0 0 0 0.1 0
D 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
K 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
R 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
H 0 -0.1 -0.2 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0.3 -0.1 -0.1 0.4 -0.1
N 0.6 -0.5 -0.3 -0.1 0.2 -0.1 -0.1 0 0 0 -0.1 0 0 -0.1 0 0.3 0.2 -0.2 0.5 -0.3
Q 0 -0.3 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0.4
S 0 0 -0.2 0 0.3 -0.1 0.1 -0.1 0 0 0 0 0 0 0 -0.1 -0.2 0.4 0.7 -0.1
T -0.1 0.5 0.4 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.3 -0.1
G 0.1 0.6 0.1 0.1 -0.3 -0.1 -0.1 -0.1 0 0 -0.1 0 0 -0.1 0 -0.1 -0.1 0 0.5 0.4
P 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
C -0.2 0.2 0.1 0.5 -0.1 -0.1 0.3 -0.1 0 0 0 0 0 0.3 0 -0.1 -0.1 0 -0.2 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0087 0.7 0.5 0.2 0.2 1 -0.1 -0.4 -0.2 -0.5 -0.7 -0.7 -0.7 -0.7 -0.4 -0.2 0.9 0.7 1.3 -0.7 0.5
0313 0.2 1.3 0.5 0.1 0.7 0 0 -0.1 -0.3 -0.3 -0.1 -0.1 -0.3 -0.1 -0.3 0 -0.1 -0.1 -1.1 0.2
Select residue pair below:
i_j Score Prob
0087_0172 3.581 1.00
0087_0135 1.420 0.99
0087_0313 1.396 0.99
0087_0168 1.293 0.98
0087_0091 1.147 0.96
0053_0087 0.815 0.73
0087_0111 0.803 0.71
0087_0234 0.801 0.71
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0207 seconds.