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Coupling matrix for [Y:0053] and [N:0087]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0.3 0.4 0.6 0.5 -0.1 0.2 -0.2 -0.1 0 0 0 -0.4 -0.6 -0.1 0.3 -0.5 0.5 0 -0.1
F -0.6 -0.1 0.7 -0.2 0.1 -0.2 -0.2 1.1 -0.2 0 0 0 0 -0.1 0.3 -0.1 -0.6 -0.1 0 1
I 0.2 -0.1 -0.1 -0.2 -0.2 1 0 -0.1 0 0 0 0 -0.4 0.8 -0.1 -0.8 0.1 0.1 0 0.1
L -0.2 0 -0.4 0.5 -0.2 -0.2 -0.2 -0.3 0.2 -0.1 -0.1 -0.1 1 0.5 -0.1 0.6 -0.5 0.4 -0.1 0.1
V 0.3 -0.3 -0.2 -0.3 0.5 -0.1 -0.1 -0.2 0 0 0 0 0.6 0.3 -0.1 -0.1 0.2 -0.1 0 -0.1
M 0.1 -0.2 -0.1 -0.1 0.4 -0.1 -0.1 -0.2 0 0 0 0 -0.4 -0.1 -0.1 0.7 -0.2 0.6 0 -0.3
W -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.2 0 -0.2 0 -0.1 0 0
Y 0 0.1 -0.3 -0.7 -0.3 -0.4 -0.2 0.3 0.1 -0.1 -0.1 -0.1 0.6 1.1 -0.3 0.5 0.2 -0.2 -0.1 0.2
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0.2 0.1 0 -0.2 -0.1 -0.1 0 -0.1
E -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 -0.2 -0.2 0.4 -0.2 -0.1 0.5 0 -0.1
K 0.2 -0.1 0.4 0 -0.1 0 0 0 0 0 0 0 -0.1 -0.3 0 -0.1 -0.1 -0.1 0 -0.1
R -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.2 0 -0.1 0 -0.1 0 0
H -0.2 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0.8 -0.1 -0.3 -0.1 -0.2 0 0
N 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 0.5 -0.1 -0.3 0.4 0.4 0 -0.2
Q 0.2 0.2 -0.1 -0.2 -0.3 -0.1 0 0 0 0 0 0 -0.2 -0.4 0.4 0.1 0 -0.1 0 0.7
S 0.2 0 -0.2 0 0.7 0.3 0.2 -0.2 -0.1 0 0 0 -0.6 -0.9 -0.2 0.6 0.3 0.7 0 -0.5
T 0.5 -0.3 0.3 0.2 -0.3 -0.1 0.4 -0.1 0 0 0 0 0.1 -0.7 0.2 0.4 0.3 -0.5 0 -0.1
G -0.1 0.8 0.1 1 0.1 0.2 -0.1 -0.1 -0.1 0 0 0 0 -0.4 -0.2 -0.3 -0.3 -0.4 0 -0.1
P 0 0.4 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 -0.4 0 -0.2 0.7 -0.2 0 -0.1
C -0.5 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.1 0 0 0 0.1 0.2 0.3 0.1 0.6 0 0 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0053 0.6 1.2 0.1 1.5 0.3 -0.2 -0.9 0.6 -0.8 -0.6 -0.8 -1.1 -0.7 -0.1 -0.1 0.5 0.5 0.2 -0.5 0.3
0087 0.7 0.5 0.2 0.2 1 -0.1 -0.4 -0.2 -0.5 -0.7 -0.7 -0.7 -0.7 -0.4 -0.2 0.9 0.7 1.3 -0.7 0.5
Select residue pair below:
i_j Score Prob
0087_0172 3.581 1.00
0087_0135 1.420 0.99
0087_0313 1.396 0.99
0087_0168 1.293 0.98
0087_0091 1.147 0.96
0053_0087 0.815 0.73
0087_0111 0.803 0.71
0087_0234 0.801 0.71
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
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