May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0069] and [A:0091]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 -0.6 -0.2 -0.2 0.1 0.7 -0.1 -0.1 0 -0.1 0 -0.1 0 0.2 0 0.2 -0.3 0.1 -0.1 0.3
F -0.5 0.4 0.3 0 -0.5 -0.2 -0.2 0.3 -0.1 -0.1 0 0.3 0 0.5 0 0.2 0.4 0.2 -0.1 -0.2
I 0.3 0.8 0.4 -0.3 0 -0.2 -0.3 0.2 -0.1 0.7 -0.1 0.3 -0.1 -0.4 -0.1 0 0 -1 -0.1 0.5
L 0.3 -0.1 0.3 -0.1 0.5 0.1 -0.3 0.1 0.4 -0.2 -0.1 -0.2 -0.1 0 -0.1 -0.2 0.1 0 0.3 0.3
V 0.4 0 0.2 0.2 0.2 -0.2 -0.3 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.2 0.2 -0.1 -0.1 0.5
M 0.2 -0.3 -0.1 -0.2 0.7 -0.1 -0.1 -0.1 0 0 0 0 0 -0.1 0 0 0 -0.2 0 0.1
W 1 0.3 -0.1 0.9 -0.4 0 -0.1 -0.1 -0.1 -0.2 0 -0.1 0 0.3 0 0.1 -0.3 -0.8 -0.1 0.8
Y -0.1 0 -0.5 0.3 0.1 -0.2 0.2 -0.1 -0.1 -0.2 0 -0.1 0 0.5 0 -0.1 0.7 0.5 -0.1 0.4
D -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 -0.1 0 -0.1
E -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 -0.1 0 -0.1
K 0.4 0 -0.1 0.1 -0.2 -0.1 -0.1 -0.1 0 0 0 0 0 -0.1 0 -0.4 -0.1 1.1 0 -0.4
R -0.5 0.4 -0.1 0.1 -0.2 0.4 -0.1 -0.1 0 0 0 0 0 -0.1 0 -0.1 -0.5 1.4 0 -0.4
H -0.6 0.1 0.3 0.1 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0.2 0.1 0.2 0 -0.3
N -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 -0.1 -0.1 0 -0.1
Q -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 -0.1
S 0.3 -0.4 -0.1 -0.2 -0.2 -0.1 -0.1 -0.1 0 0 0 0 0 -0.1 0 0.7 0.1 0.1 0 -0.1
T 0.5 0 -0.1 -0.2 0.6 -0.1 -0.1 -0.1 0 0.1 0 0 0 -0.2 0 0.2 0.1 -0.3 0 -0.4
G 0.4 -0.3 -0.1 -0.1 -0.2 0 -0.1 0 0 0 0 0 0 -0.1 0 0.8 0 -0.3 0 0.1
P -0.5 0.4 0.4 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 -0.2
C -0.4 -0.5 -0.2 -0.3 0.1 -0.1 1.9 -0.1 -0.1 -0.1 0 0 0 -0.2 0 0.6 0.4 -0.7 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0069 0.5 1.4 1.1 1.6 1.1 -0.5 1.8 1.7 -1.6 -1.6 -0.1 0.1 -0.2 -1.4 -1.4 -0.2 -0.1 -0.3 -0.9 0.3
0091 0.7 0.1 0.1 0 0.5 -0.2 0 -0.1 -0.4 -0.5 -0.6 -0.4 -0.6 0.1 -0.6 1.3 0.8 -0.3 -0.5 1.1
Select residue pair below:
i_j Score Prob
0069_0091 0.970 0.88
0069_0330 0.861 0.78
0062_0069 0.748 0.63
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0116 seconds.