May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [L:0062] and [I:0069]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 -0.4 -0.1 -0.1 0.4 -0.1 0.1 -0.1 -0.1 -0.1 0.1 -0.1 -0.2 -0.1 -0.1 -0.1 0.2 0.5 -0.1 0.2
F 0 0.1 0.2 0.3 0.2 0.1 -0.6 0.2 -0.1 -0.1 0.3 0.5 -0.4 0.4 -0.1 -0.1 -0.1 -0.3 -0.1 0.1
I -0.1 -0.1 0.5 0.2 0.2 0.5 -0.5 -0.4 -0.2 -0.2 -0.1 0.6 -0.5 -0.2 0.1 0.5 0.3 0.1 0.2 0.3
L -0.1 0.1 0.1 0.3 -0.2 0.4 -0.1 0.1 -0.2 -0.2 0.6 -0.2 0.1 -0.2 0.1 0.4 0.1 0.6 -0.4 -0.1
V 0.1 0.4 0.2 0.3 0.4 0.1 0 -0.1 -0.2 -0.2 -0.1 0.2 0.4 -0.2 -0.3 -0.3 -0.2 0.1 -0.4 0.8
M -0.3 0.2 0.1 0.6 0.1 -0.1 -0.3 0.4 0 0 -0.2 -0.2 -0.1 0 0 0.2 -0.3 -0.1 0.4 -0.2
W 0.3 -0.1 -0.2 -0.3 0.2 0 -0.3 -0.2 0 0 -0.1 0 0 0 0 0.4 -0.1 0 0 -0.1
Y -0.1 -0.1 -0.1 0.6 -0.1 0 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
H -0.1 -0.1 -0.1 0.1 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 -0.1 -0.1 -0.1 -0.1 0 0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1
S 0.3 0.5 0.4 -0.5 -0.4 -0.2 0.8 0.1 0 0 -0.3 -0.2 0 0 0 -0.2 0.2 0.1 0 -0.4
T 0.4 0.1 0.3 0 0 -0.4 0.4 0.1 -0.1 -0.1 -0.5 0.2 0.1 -0.1 -0.1 -0.4 0.5 -0.5 0.3 -0.1
G 0.1 -0.3 0.3 -0.1 -0.2 -0.2 0.6 0.1 0 0 0.1 -0.3 0.8 0 -0.1 -0.3 0 -0.3 -0.1 0.2
P -0.6 0 -0.2 0.4 0 -0.3 1.5 0.4 -0.1 -0.1 0.3 -0.5 0 -0.2 -0.2 0.3 -0.2 -0.1 -0.2 0.1
C 0.1 0.4 -0.6 -0.2 0.6 -0.2 0.1 1.1 0 0 -0.2 0.2 -0.2 0 0 -0.3 -0.2 0 0 -0.3

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0062 0.7 1.1 1.7 1.9 1.8 0.3 -0.9 -0.9 -1 -1 -1 -1 -1 -1 -0.9 0.3 0.6 0.4 0.6 0.3
0069 0.5 1.4 1.1 1.6 1.1 -0.5 1.8 1.7 -1.6 -1.6 -0.1 0.1 -0.2 -1.4 -1.4 -0.2 -0.1 -0.3 -0.9 0.3
Select residue pair below:
i_j Score Prob
0069_0091 0.970 0.88
0069_0330 0.861 0.78
0062_0069 0.748 0.63
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0103 seconds.