May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [K:0131] and [G:0134]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.4 -0.1 -0.2 -0.2 -0.3 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 0.3 0.2 0 0.3 -0.2 0.6 0.4 0
F 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 0 0
I 0 0 0 0 0 0 0 0 0.3 0 -0.1 0 0 -0.1 0 -0.1 0 -0.2 0 0
L 0 0 0 0 0 0 0 0 -0.2 0.1 0.1 0 0 -0.1 0 -0.1 0 -0.1 0 0
V -0.1 0 0 -0.3 -0.1 0 0 0 0 0.1 -0.2 -0.1 0 0.1 -0.1 -0.2 0.5 0.6 0.3 0
M 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 0 0
W 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 0 0
Y 0 0 0 0 0 0 0 0 -0.2 -0.1 -0.1 0 0 -0.2 0 0.3 -0.1 -0.2 0 0
D -0.1 0.1 0.2 0.4 -0.1 -0.3 -0.2 0 0.5 0.2 0.2 -0.6 -0.3 0.7 -0.3 0.5 0.2 0.2 -0.2 -0.2
E 0.4 -0.1 0.1 0.6 -0.2 0 -0.1 -0.2 0.3 0.4 -0.5 0.6 0.2 0.3 -0.5 -0.3 -0.6 0.9 -0.2 -0.1
K -0.1 -0.1 -0.2 0.7 -0.1 -0.1 -0.1 -0.1 0.3 0 0.8 -0.2 -0.1 0.3 -0.4 0 -0.2 0.2 -0.3 -0.1
R 0.3 0 0 -0.1 -0.1 0 0 0 -0.2 -0.1 0.2 0 0 0.3 0 -0.2 -0.1 0.4 -0.1 0
H -0.1 0 0.2 -0.1 0 0 0 0 0.2 -0.1 -0.1 0 0 -0.2 0 -0.1 -0.1 -0.2 0 0
N 0.1 -0.1 0 -0.4 0.5 -0.1 0 -0.1 0.6 -0.2 -0.1 0.2 -0.1 -0.5 0.1 0.7 0.4 -0.8 0.2 0
Q 0.2 0 -0.1 0 -0.1 0.2 0 0 -0.3 -0.3 0.8 0 0 0.1 -0.1 -0.3 -0.1 0 -0.2 0
S 0.2 -0.1 0.2 0.8 0.1 -0.1 -0.1 -0.1 -0.4 0 -0.5 -0.1 -0.1 0.3 0 0.1 0.2 -0.3 -0.2 0
T -0.2 0 -0.1 -0.1 0.2 0.6 0 0 -0.1 -0.3 -0.2 -0.1 0 0 0.2 0 0.6 -0.3 0.2 0
G -0.4 -0.1 -0.2 -0.7 -0.1 -0.2 0.1 0 0 -0.1 0 0.6 -0.1 0.2 0.4 0.6 0.6 -0.4 0.3 0
P 0.4 -0.1 -0.1 -0.3 -0.2 -0.1 -0.1 -0.1 0.2 0.7 0.2 -0.3 -0.2 -0.1 0.7 -0.6 -0.1 0.8 0.2 -0.1
C 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0131 0.7 -1.4 -1.2 -1.2 -0.1 -1.4 -1.4 -0.9 2.4 2.1 1.2 -0.2 -0.7 1 0 0.7 0.2 1.1 1.3 -1.4
0134 0.3 -1.2 -0.5 -0.5 -0.1 -0.9 -1.2 -1.3 1.4 0.7 0.8 -0.5 -1.1 1.2 -0.1 0.8 1 0.8 0.2 -1.3
Select residue pair below:
i_j Score Prob
0131_0134 0.868 0.83
0119_0134 0.685 0.58
Local Interactions:
i_j Score Prob
0133_0134 1.699 1.00
0132_0134 0.961 0.90
0134_0135 0.499 0.28
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0144 seconds.