May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

GREMLIN_4ote Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [L:0126] and [A:0167]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 -0.1 0 -0.2 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0.2 0 0
F 0.1 0.3 0.3 0.1 0 0.3 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0.3 -0.1 -0.2
I 0.2 0.2 0.5 0.4 0.2 -0.1 -0.2 0.5 -0.1 -0.1 0 0 0 0 0 0 -0.1 0.2 -0.5 0
L 0.5 -0.6 0.6 1.1 0.3 0.3 -1 -0.8 -0.4 0 -0.2 -0.2 -0.2 -0.2 -0.2 -0.1 0.1 0.5 1.2 0.3
V 1 0.1 0 0.5 0.6 0.1 -0.1 -0.6 0 -0.1 0 0 0 0 0 0 -0.1 -0.3 -0.3 0.1
M -0.3 -0.2 0.2 0.5 0.1 0.2 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 0
W -1 1.1 -0.5 -1.1 -0.2 -0.2 1.4 1.9 0.4 0 0 0 0 0 0 0 0 -0.5 -0.1 -0.2
Y -0.1 0.9 0 -0.5 0.3 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 -0.2 -0.1 0
D -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0.1 -0.2 -0.1 0.3 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
R -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0.3 -0.1 -0.1 0.2 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
S 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0126 0.1 1.3 1.6 2.8 1.4 0.3 1.4 0.1 -0.8 -0.8 -0.4 -0.8 -0.7 -0.8 -0.3 -0.6 -0.6 -0.8 -0.8 -0.8
0167 -0.1 1.7 0.8 0.7 1.2 0.5 -0.2 0.5 -0.4 -0.4 -0.6 -0.6 -0.6 -0.6 -0.6 -0.5 -0.4 0.2 -0.3 -0.1
Select residue pair below:
i_j Score Prob
0126_0148 1.514 1.00
0099_0126 0.770 0.71
0122_0126 0.730 0.65
0126_0167 0.711 0.62
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...

Page generated in 0.0134 seconds.