May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0122] and [L:0126]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0.1 0.4 0.5 0.4 -0.1 -0.2 0.3 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1
F 0 0 0 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 0 -0.1 -0.2 -0.1 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0 0 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V -0.1 -0.3 -0.1 0.8 -0.3 -0.1 0.6 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
M 0 0 -0.1 -0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.1 -0.5 -0.1 0 -0.1 0 0 0 0.5 0 0 0 0 0 0 0 0 0
D -0.1 0.2 0.9 -0.5 0.6 0.2 -0.1 -0.1 0 0 -0.1 0 0 0 -0.1 0 -0.1 0 0 0
E -0.5 0.8 0.2 0.9 0.1 -0.2 0.6 0.4 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.2 -0.1 -0.1 -0.1
K -0.1 0.4 -0.4 0.9 -0.4 -0.1 0 0.1 0 0 -0.1 0 0 0 -0.1 0 0 0 0 0
R 0.5 0.1 -0.2 0.2 0.2 -0.1 -0.2 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
H 0.2 -0.3 0.6 -0.4 0.5 0.5 -0.3 -0.1 0 0 -0.1 0 0 0 -0.1 0 0 0 0 0
N 0 -0.2 -0.1 0 0.4 0 0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.2 0.1 0.2 0.9 -0.1 0.2 0.2 -0.1 -0.1 -0.1 -0.3 -0.1 0 -0.1 0.3 0.1 0.2 -0.1 -0.1 -0.1
S 0 -0.2 -0.1 0.5 0.1 -0.1 0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 -0.1 0.1 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 -0.1 -0.1 0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0122 1.8 -0.9 -0.6 -0.9 0 -0.8 -0.9 -0.7 1.3 1.9 0.7 0.3 0.5 0.1 1.4 0.5 -0.8 -0.4 -0.9 -0.9
0126 0.1 1.3 1.6 2.8 1.4 0.3 1.4 0.1 -0.8 -0.8 -0.4 -0.8 -0.7 -0.8 -0.3 -0.6 -0.6 -0.8 -0.8 -0.8
Select residue pair below:
i_j Score Prob
0126_0148 1.514 1.00
0099_0126 0.770 0.71
0122_0126 0.730 0.65
0126_0167 0.711 0.62
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0478 seconds.