OPENSEQ.org -1515599153- GREMLIN Submission

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Coupling matrix for [S:0113] and [N:0117]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.8	0	-0.1	0	-0.1	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	-0.2	0	0
F	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
I	0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	-0.1	0	0
L	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
V	-0.3	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0.5	-0.1	0	-0.1	0	0
M	0.3	0	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	-0.2	0	0.2	0	0
W	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
Y	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
D	-0.1	-0.5	1.3	0.3	1	0.4	-0.1	-0.1	0.1	-0.1	-0.1	0	-0.1	-0.3	0.4	0.3	-0.3	-0.4	-0.3	-0.1
E	-0.8	1.2	0.8	-0.1	1	1	0	0	-0.2	0	0	0	0	-0.2	-0.2	-0.7	-0.1	-0.5	-0.2	-0.1
K	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
R	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	-0.1	0	0
H	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
N	1.2	-0.4	-0.7	-0.3	-0.3	-0.5	-0.2	-0.2	-0.1	-0.1	-0.2	-0.2	-0.2	0.5	-0.3	0.3	0.5	1.3	0.5	0.4
Q	0.5	-0.1	0.2	0	-0.3	-0.1	0	0	-0.1	0	0	0	0	-0.1	-0.1	0.3	-0.1	0.2	0	0
S	-0.2	-0.1	-0.2	0	-0.2	-0.1	0	0	0.3	0	0	0	0	0.7	-0.1	0.3	-0.1	0.1	-0.1	0
T	-0.2	-0.1	-0.4	-0.1	-0.1	-0.2	0	0	0	0	0	0	0	-0.1	-0.1	1.1	0.2	0.3	0	0
G	0.3	0	-0.1	0	-0.2	0	0	0	0	0	0	0	0	0	0	0.3	-0.1	0.1	0	0
P	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
C	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0113	-0.1	-0.7	-0.5	-0.7	-0.4	-0.1	-0.7	-0.7	2.2	1.9	-0.7	-0.7	-0.7	2	0.5	0.5	0.5	0.3	-0.7	-0.7
0117	1	-0.4	0.6	-0.4	0.7	0.3	-0.7	-0.7	-0.1	-0.5	-0.7	-0.7	-0.7	0.4	0.1	1.3	-0.1	1.6	-0.3	0

Select residue pair below:

i_j	Score	Prob
0108_0117	1.956	1.00
0117_0169	0.720	0.64
0113_0117	0.652	0.53
0086_0117	0.576	0.40
0110_0117	0.543	0.34

Local Interactions:

i_j

Score

Prob

See all coupling residues
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