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Coupling matrix for [A:0086] and [N:0117]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 0 -0.2 0 -0.2 -0.1 0 0 -0.1 0 0 0 0 0.4 -0.1 -0.3 -0.1 -0.2 -0.1 0.8
F 0.9 -0.1 0.5 -0.1 -0.5 0.3 0 0 -0.1 -0.1 0 0 0 -0.1 -0.1 0.6 -0.5 0.4 -0.1 -0.3
I -0.4 -0.6 1.3 0.6 1.2 0.9 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.5 -0.4 0.5 0.2 -0.3 -0.1 -0.5
L 0.6 -0.5 -0.4 -0.1 0.1 -0.3 -0.1 -0.1 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.4 0.5 0.3 0.6 0.1 0.2
V 0.6 0.4 -0.3 -0.1 0.1 -0.2 0 0 -0.1 0.4 0 0 0 -0.1 0.7 -0.4 -0.3 0.2 -0.1 -0.1
M 0.6 0.8 0.1 -0.3 0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.1 -0.1 -0.1 0.6 -0.2 -0.2 0.8 0.5 0 -0.3
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
Y 0.2 -0.1 0 0 -0.3 -0.1 0 0 -0.1 0 0 0 0 -0.1 -0.1 1.6 -0.2 -0.3 -0.1 -0.1
D -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
E -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
K -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
R -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
H -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 -0.3 0.5 0
Q 0.2 -0.1 -0.2 0 0.3 0 0 0 0 0 0 0 0 0 0 -0.4 -0.1 0.5 0 -0.1
S -0.4 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 0.6 0 0
T 0.3 0 -0.1 0 -0.1 -0.1 0 0 -0.1 0 0 0 0 0.3 0.4 -0.5 -0.1 0.2 -0.1 -0.1
G -0.1 0 -0.1 0 -0.2 -0.1 0 0 0 0 0 0 0 -0.1 0.4 0.1 0.1 -0.2 -0.1 0.4
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
C -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0086 0.4 1.3 2.7 1.8 1.2 2.7 -0.9 0.3 -1.1 -1.1 -1.1 -1.1 -1.1 -0.7 0 -0.6 0.1 0.2 -0.9 -1.1
0117 1 -0.4 0.6 -0.4 0.7 0.3 -0.7 -0.7 -0.1 -0.5 -0.7 -0.7 -0.7 0.4 0.1 1.3 -0.1 1.6 -0.3 0
Select residue pair below:
i_j Score Prob
0108_0117 1.956 1.00
0117_0169 0.720 0.64
0113_0117 0.652 0.53
0086_0117 0.576 0.40
0110_0117 0.543 0.34
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
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