OPENSEQ.org -1515599153- GREMLIN Submission

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Coupling matrix for [K:0079] and [A:0197]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	0.6	0.6	0.3	0.3	-0.5	-0.2	0.2	-0.2	0.1	-0.3	-0.6	-0.2	-0.2	0.4	0.1	-0.2	-0.1	-0.2	-0.1
F	-0.7	-0.1	-0.5	-0.2	0.2	-0.1	-0.1	0.2	0	-0.2	0.1	1	-0.1	-0.1	-0.1	-0.1	0.1	0.4	-0.1	0
I	-0.5	-0.1	-0.3	-0.1	-0.1	-0.1	0	-0.1	0	-0.1	0	1.3	0	0	-0.1	-0.1	-0.1	-0.1	-0.1	0
L	0.7	-0.1	-0.4	-0.1	0.3	-0.1	0	-0.1	0	-0.1	-0.1	-0.3	0	-0.2	0.4	-0.1	0.1	-0.3	-0.1	0
V	0.2	0.2	0.2	0.1	-0.7	-0.1	-0.1	-0.2	-0.1	0.2	0.1	0.5	-0.1	-0.1	-0.1	-0.2	-0.2	-0.1	-0.2	0
M	-0.4	0	-0.1	0	-0.3	0	0	0	0	0	-0.1	0	0	0	0	0	-0.1	0.6	0	0
W	-0.3	0	-0.1	0	-0.1	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	0
Y	-0.6	-0.1	-0.4	-0.1	-0.5	-0.1	-0.1	-0.1	0	-0.1	-0.2	1.9	0	0.4	0	-0.1	-0.2	0.3	-0.1	0
D	0.1	-0.3	0.8	-0.1	0.2	0.5	-0.1	-0.3	-0.1	-0.2	0.1	-0.3	-0.1	0.3	-0.2	0.4	-0.1	-0.1	-0.1	0
E	-0.2	0.1	0.2	-0.3	-0.5	-0.2	-0.1	0.1	-0.1	-0.2	0.2	0.2	-0.1	0.9	-0.2	-0.3	0.3	-0.1	0.9	0
K	0.6	-0.2	-0.6	0	0.1	0.1	-0.2	1.1	-0.2	-0.5	-0.5	-1.2	-0.3	-0.2	0.8	0.5	0.2	0.3	1.2	-0.1
R	0.1	-0.1	0.5	-0.1	0.5	-0.1	0	-0.1	0	-0.1	-0.1	-0.2	0	-0.1	0	-0.1	-0.1	-0.2	-0.1	0
H	0	-0.1	0.3	-0.2	-0.2	0.1	0	-0.1	0	0.7	0.1	-0.1	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0
N	0.8	-0.2	-0.8	-0.2	0.6	-0.2	-0.1	-0.2	0	-0.2	1.3	-0.3	-0.1	0.4	-0.1	0	-0.4	-0.3	0.4	0
Q	0.4	-0.3	0.7	0.4	-0.2	0.7	-0.2	-0.3	0.3	-0.3	-0.7	-0.6	0.3	-0.3	0	0.9	0.7	-0.3	-0.4	-0.1
S	0	-0.3	0.1	0	-0.1	-0.2	-0.1	-0.3	-0.1	0.1	0.7	0.4	-0.1	-0.2	-0.3	0.1	-0.2	0.7	-0.1	0
T	0.4	0.1	-0.2	-0.1	0.2	-0.3	-0.1	0.1	-0.1	-0.2	0.4	0.2	-0.1	-0.3	0.1	-0.3	0.1	0.6	-0.3	0
G	-0.5	0.8	1.4	0.1	1.2	-0.4	1	0.5	0.1	-0.2	-0.1	-0.9	0	-0.5	-0.5	-0.5	0.4	-0.4	-0.7	-0.2
P	0.1	-0.3	-0.4	0.9	-0.1	1	0.1	-0.4	-0.1	0.9	-0.7	-0.5	0.3	0	0	0.1	0	-0.4	0.1	0
C	-0.3	0	-0.1	0	-0.1	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0079	1.5	-0.1	-0.9	-0.9	0	-1.2	-1.6	-0.5	0.7	0.6	1.5	-0.6	-0.6	0.3	1	0.7	0.5	1.9	0.6	-1.6
0197	1.8	-0.3	1.4	0.2	1.3	-0.1	-0.8	-0.2	-1	-0.5	0.2	0.7	-1	-0.6	-0.4	-0.1	0.4	0.3	0.1	-1.3

Select residue pair below:

i_j	Score	Prob
0079_0197	1.261	0.99
0197_0239	0.876	0.84
0062_0197	0.533	0.33
0083_0197	0.497	0.28

Local Interactions:

i_j

Score

Prob

See all coupling residues
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