May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

GREMLIN_4ote Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [A:0067] and [I:0075]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 1 -0.6 0.3 -0.1 -0.2 0 0 0 0 0 0 0 -0.2 0 -0.1 0 0 0 0
F -0.1 -0.6 0.8 1 0.4 -0.1 -0.1 -0.2 0.1 -0.1 -0.1 -0.1 -0.1 -0.5 0 -0.1 -0.1 -0.2 -0.1 -0.1
I 0 -0.2 -0.7 -0.3 -0.2 0.9 0 0 0 0 0.4 0 0 0.7 0 0 0 0 0 0
L 0 -0.3 0.1 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V -0.1 0.6 -0.6 -0.8 -0.2 -0.1 0 0.3 -0.1 0.3 -0.1 0 0 1.2 0.2 -0.1 0.2 -0.1 0 0
M 0 0.3 -0.4 -0.3 -0.1 0.7 0 0 0 0 0 0 0 0.1 0 0 0 0 0 0
W -0.1 -0.8 0.9 0.1 1.1 -0.3 0 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0
Y -0.1 0.4 0.3 0.6 -0.4 -0.3 -0.1 0.2 0.2 -0.1 -0.1 -0.1 -0.1 -0.3 0.3 -0.1 -0.1 -0.1 -0.1 -0.1
D 0 -0.7 0.9 0.1 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
E 0 0.3 0.4 -0.1 0.2 0.1 0 0 -0.1 0 0 0 0 -0.1 -0.1 0 0 0 0 0
K 0 -0.1 -0.1 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 -0.1 -0.1 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0.2 -0.3 0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.2 0.1 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 1.1 0.5 -0.1 0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.4 -0.1 -0.1 -0.1 0.3 0 0
S 0 -0.3 0.2 0.5 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
T 0 -0.1 -0.3 0.5 -0.1 -0.1 0 0 0 0 0 0 0 -0.2 0 0.4 0 0 0 0
G 0 -0.1 -0.1 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 -0.1 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 -0.1 -0.1 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0067 0.5 1.4 0.6 -0.5 1 0.1 0.3 0.8 -0.1 0.7 -0.9 -0.9 -0.5 -0.1 0.7 0.1 0.1 -0.9 -0.9 -0.9
0075 -0.4 1 1.1 1.5 0.4 0.8 -0.5 -0.1 -0.1 -0.2 -0.3 -0.5 -0.5 -0.1 0.1 -0.3 -0.3 -0.3 -0.5 -0.5
Select residue pair below:
i_j Score Prob
0067_0073 1.963 1.00
0046_0067 1.324 0.99
0067_0075 0.743 0.67
0063_0067 0.687 0.58
0067_0072 0.508 0.29
Local Interactions:
i_j Score Prob
0067_0068 1.080 0.95
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...

Page generated in 0.0173 seconds.