May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [Y:0063] and [A:0067]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0.1 -0.1 0 -0.1 -0.1 0.1 -0.4 0.3 -0.1 0 0 0 0.4 -0.2 0.7 -0.1 0 0 0
F 0.9 0.3 -0.2 -0.2 -0.6 -0.1 1.4 0.7 0 0.2 -0.2 -0.2 -0.2 -0.3 0.4 0.4 -0.1 -0.2 -0.2 -0.2
I 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
L -0.1 0.6 0 0 -0.1 0 -0.2 -0.3 0 0 0 0 0 0 -0.2 0 0.3 0 0 0
V -0.1 0 0 0 0.3 -0.1 -0.1 -0.3 0 -0.1 0 0 0.4 0 -0.2 -0.1 0.3 0 0 0
M 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
W -0.3 -0.2 0.1 -0.1 1.5 -0.2 -0.4 -0.1 -0.1 0 0 0 -0.1 -0.1 0.4 0.1 0.5 0 0 0
Y -0.5 1.1 0.5 0.2 0.1 0.4 -0.1 0.8 0.1 0.9 -0.2 -0.2 -0.1 0 1 -0.8 -0.7 -0.2 -0.2 -0.2
D 0 0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
E 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
K 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
R 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
H 0.3 0.7 0.4 0 -0.1 -0.1 -0.2 -0.4 0 -0.1 0 0 0 0 -0.2 -0.1 -0.1 0 0 0
N -0.1 -0.3 -0.1 0 -0.1 0.4 -0.1 0.2 0 -0.1 0 0 0 0 0.1 0 -0.1 0 0 0
Q 0.5 -0.2 0 0 -0.1 0 -0.1 -0.1 0 -0.1 0 0 0 0 -0.2 0 0.3 0 0 0
S 0 -0.2 0 0 -0.1 0 -0.1 0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
T -0.1 -0.2 0 0 -0.1 0 0 0.8 0 0 0 0 0 0 -0.1 0 -0.1 0 0 0
G 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
P 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
C 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0063 0.5 3.1 -0.8 -0.2 0.1 -0.8 1.5 2.9 -0.6 -0.8 -0.8 -0.8 0.2 -0.1 -0.3 -0.2 0 -0.8 -0.8 -0.8
0067 0.5 1.4 0.6 -0.5 1 0.1 0.3 0.8 -0.1 0.7 -0.9 -0.9 -0.5 -0.1 0.7 0.1 0.1 -0.9 -0.9 -0.9
Select residue pair below:
i_j Score Prob
0067_0073 1.963 1.00
0046_0067 1.324 0.99
0067_0075 0.743 0.67
0063_0067 0.687 0.58
0067_0072 0.508 0.29
Local Interactions:
i_j Score Prob
0067_0068 1.080 0.95
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.3556 seconds.