OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [R:0234] and [D:0267]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.7	-0.2	0.2	0.2	0.2	0	-0.3	0	0.3	-0.2	-0.4	0.6	-0.6	0.1	-0.2	-0.5	0.4	0.7	-0.1	-0.1
F	-0.1	0	0	0	0	0	0	0	-0.1	-0.1	0.1	-0.1	0	0	-0.1	0	-0.1	0	0	0
I	-0.2	0	0.2	0.1	-0.2	0	0	0	0.1	0	0	-0.3	-0.1	-0.1	-0.2	0.2	-0.2	0.4	0	0
L	-0.2	0	0.3	0.2	0.1	-0.1	0	-0.1	-0.1	-0.4	0.3	-0.5	0.2	-0.3	0.1	0.3	-0.4	-0.2	0	0
V	-0.2	0	0	-0.1	0.1	0	0	0	0.1	-0.2	0.2	0.2	0	-0.1	0.3	-0.1	-0.1	-0.1	0	0
M	0	0	0	-0.1	0.3	0	0	0	-0.2	0	0.1	-0.1	0	-0.1	-0.1	-0.1	-0.1	0	0	0
W	-0.1	0	0	0	0	0	0	0	-0.1	-0.1	-0.1	-0.1	0	0	-0.1	0	-0.1	0	0	0
Y	-0.1	0	-0.1	-0.1	-0.1	0	0	0	0.1	-0.3	-0.2	0.1	0	0.2	-0.2	0.1	0.2	-0.1	0	0
D	0.4	-0.2	-0.3	-0.2	0.2	0.1	-0.5	0.6	-0.3	-0.6	0.1	0.7	0.5	0.6	-0.1	0.1	0.1	-0.1	-0.2	0
E	-0.1	-0.2	0.7	-0.1	0.7	-0.5	-0.3	-0.6	-0.4	-0.5	0.8	0.9	0.8	0.2	-0.2	0.2	0.3	-0.4	0.1	-0.2
K	0.1	0.5	0.1	-0.1	-0.1	0.1	0	-0.3	0.2	0.7	-0.2	-0.9	0.3	-0.1	0.1	0.3	0.2	-0.1	-0.1	-0.1
R	0.1	-0.1	-0.3	0.1	-0.4	0.1	-0.3	0.2	0.6	1.3	-0.4	-0.3	0.1	-0.5	-0.3	0.3	-0.1	0.3	-0.1	-0.1
H	-0.1	0	-0.1	-0.2	-0.1	-0.1	-0.1	-0.1	0.4	0.4	-0.2	-0.4	-0.1	-0.3	0.3	0.3	0.3	-0.2	0	0
N	0.1	-0.1	-0.2	-0.2	0.2	0.2	0.5	-0.3	-0.1	0.2	-0.5	0.6	-0.3	0.9	0.6	-0.7	-0.3	0	-0.1	-0.1
Q	0.3	-0.1	-0.1	0.5	-0.5	0.1	0.4	-0.3	-0.2	-0.1	0.6	0.1	-0.2	-0.1	0	0.1	0.2	0.3	-0.1	-0.1
S	-0.6	-0.1	-0.2	0.3	-0.1	-0.1	-0.1	-0.1	0.3	-0.2	0.8	0.2	-0.2	0	0.6	-0.2	-0.1	0.1	0	0
T	0.6	-0.1	-0.2	-0.1	-0.1	-0.1	-0.1	-0.1	0.1	0.3	0.1	-0.2	-0.2	0.1	0.1	0.4	-0.3	-0.3	0	0
G	-0.1	-0.1	-0.2	0	-0.3	-0.1	0.2	0.9	-0.1	-0.2	-0.2	0.5	-0.3	-0.3	-0.2	-0.1	0.1	-0.1	0	0
P	0.1	0	0	-0.2	-0.1	0	0	0	-0.2	0.7	-0.2	-0.3	-0.1	-0.1	0	-0.2	0.3	-0.1	0	0
C	-0.1	0	0	0	-0.1	0	0	0	-0.1	-0.1	-0.1	-0.1	0	0	-0.1	-0.1	-0.1	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0234	1.1	-1.1	-0.7	-0.3	-0.8	-0.8	-1.2	-0.9	1.1	2.1	1.3	0.8	0.1	0.4	1.3	0.4	0.2	0.2	-0.8	-0.9
0267	1	-1.4	-0.6	-0.1	-0.6	-1	-1.1	-0.7	0.9	1.3	1.1	1	-0.7	0.2	0.8	0.5	0.4	-0.1	-1.6	-1.7

Select residue pair below:

i_j	Score	Prob
0234_0267	1.667	1.00
0230_0267	1.590	1.00
0264_0267	0.965	0.90
0263_0267	0.874	0.84

Local Interactions:

i_j

Score

Prob

See all coupling residues
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