OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [A:0230] and [D:0267]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	-0.1	-0.3	0.6	-0.4	0.1	0.2	0.1	0.6	0.3	-0.6	0.5	0.5	0.3	0.3	-0.4	-0.3	-0.3	-0.1	-0.1
F	-0.2	-0.1	-0.2	-0.2	-0.3	-0.1	-0.1	-0.1	-0.6	0.3	0.1	-0.7	0.4	0.7	0.7	0.1	-0.1	-0.3	0	0
I	0.1	-0.3	0.5	0.4	1.6	-0.4	-0.4	-0.4	-0.7	0.5	0.4	0.1	-0.2	-0.3	0.1	0.3	0.5	-0.6	-0.3	0.1
L	-0.3	0.1	-0.1	0.8	-0.5	0.4	-0.2	-0.2	-0.9	0.4	-0.6	0.4	0.7	-0.3	0.4	-0.1	0.4	0.1	-0.3	-0.3
V	0.2	0.2	-0.4	-0.3	0.9	0.2	-0.1	0.1	-0.6	0	0.7	0.4	-0.6	-0.3	0.6	-0.2	0.4	-0.3	-0.1	-0.1
M	0.4	-0.1	0.3	0.1	-0.2	0.2	0.3	-0.1	0	0.3	-0.2	-0.8	-0.3	-0.1	-0.1	0.1	-0.6	0.9	0	0
W	-0.1	0	0	0	0	0	0	0	-0.1	-0.2	-0.1	-0.1	0	0	-0.1	-0.1	-0.1	0.4	0	0
Y	0.1	0	-0.1	-0.2	-0.2	-0.1	0.4	-0.1	-0.1	0.2	0.2	0.3	0.3	0.1	-0.3	0.1	-0.3	-0.2	0	0
D	-0.1	0	-0.1	-0.1	-0.1	0	0	-0.1	-0.1	-0.3	0	0.5	-0.1	0.1	0	-0.1	0.1	-0.1	0	0
E	0.1	-0.1	-0.1	-0.2	0.7	-0.1	-0.1	0.2	0.2	-1.1	0.4	0.3	-0.3	-0.4	0.2	0	0	0	0	0
K	-0.2	-0.1	0.2	-0.3	-0.3	-0.1	-0.1	0.3	0.9	0.5	-0.1	-0.6	0.1	0.5	-0.3	-0.2	-0.2	-0.3	0.4	0
R	0.1	-0.1	-0.1	-0.6	-0.7	0.1	-0.2	-0.1	1.9	0.2	-0.4	-0.6	0.2	0.4	-0.3	-0.4	0.2	0.8	-0.1	-0.1
H	-0.2	0	-0.1	-0.1	-0.1	-0.1	0	-0.1	0.1	0.1	0.1	0.4	-0.1	-0.2	0	-0.3	-0.2	-0.2	0	0
N	0.1	0	0	-0.1	-0.1	0	0	0	-0.2	-0.2	-0.1	0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0	0
Q	0.3	-0.1	-0.2	-0.3	-0.4	-0.1	-0.1	-0.1	0.9	0.1	0	-0.2	-0.3	0.2	0.1	0.5	-0.1	0.8	0	0
S	-0.1	-0.1	0.1	0.1	-0.1	-0.2	0.2	0.7	-0.2	-0.1	0.7	0.4	-0.3	0	0.1	-0.3	0.1	-0.1	-0.1	0
T	-0.5	0	-0.1	0.6	0.2	-0.1	0	-0.1	0.1	-0.4	-0.2	-0.2	-0.1	0.4	-0.3	0	0.3	-0.2	0	0
G	0.2	0	-0.1	0.2	-0.2	0	0	-0.1	0.2	-0.4	0.1	-0.3	0.2	-0.4	-0.4	-0.1	0	-0.3	0	0
P	0.9	0.1	0.5	-0.2	0	-0.3	-0.2	-0.3	-0.9	-0.2	0.5	0.2	-0.4	-0.1	-0.1	1	0.6	-0.1	-0.1	-0.1
C	-0.2	0	0	0	-0.1	0	0	0	-0.1	0.2	-0.2	0.3	0	-0.1	-0.1	0.3	-0.1	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0230	1	-0.2	1.4	1.5	0.9	0.2	-1.5	-0.1	-0.5	0.2	0.1	0.9	-0.5	-1.4	0.3	0.5	-0.3	-0.5	0.7	-1.3
0267	1	-1.4	-0.6	-0.1	-0.6	-1	-1.1	-0.7	0.9	1.3	1.1	1	-0.7	0.2	0.8	0.5	0.4	-0.1	-1.6	-1.7

Select residue pair below:

i_j	Score	Prob
0234_0267	1.667	1.00
0230_0267	1.590	1.00
0264_0267	0.965	0.90
0263_0267	0.874	0.84

Local Interactions:

i_j

Score

Prob

See all coupling residues
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