OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [R:0234] and [G:0237]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	-0.1	-0.4	0	-0.1	-0.3	0.3	-0.3	0.3	0.1	-0.6	0.4	0.2	-0.2	0.2	0.4	0	0.1	0.4	-0.2
F	-0.2	0	0.1	-0.2	-0.1	-0.1	0	0	0	-0.1	0	0.2	0	0	-0.1	-0.1	0	0	0	0
I	-0.1	0	-0.2	-0.4	-0.1	0.3	0	-0.1	-0.1	-0.1	0.2	0	0	0	0.2	0.3	-0.1	-0.1	0	0
L	-0.5	-0.1	-0.5	-0.2	0	0	0	-0.1	-0.1	0.3	1.1	0	-0.1	-0.1	0.4	0.1	0.2	-0.2	0	0
V	0.1	0	-0.2	-0.2	0.2	-0.1	0	0.1	-0.1	0	-0.2	0	0.1	0	0.2	-0.1	-0.1	-0.1	0	0
M	0.1	0	-0.2	0.2	-0.1	0.3	0	0	-0.1	-0.2	-0.1	0.2	0	0	-0.1	-0.1	0	0	0	0
W	0.1	0	-0.1	-0.1	0	0	0	0	0	-0.1	-0.1	-0.1	0	0	-0.1	0	0	0	0	0
Y	0.1	0	0.7	-0.4	0.5	-0.1	0	0	-0.1	-0.3	0.1	-0.3	0	-0.1	-0.2	-0.2	-0.1	-0.1	0	0
D	0.2	-0.2	0.5	0.7	-0.1	0.1	0.1	-0.8	0.3	-0.1	0.3	0.2	-0.6	-0.2	-0.3	-0.1	0	0.4	-0.5	0.4
E	0.4	-0.3	-0.2	0.2	0.1	0.1	-0.2	-0.1	-0.3	-0.2	0.6	0.6	0.1	0.6	0.2	0.2	-0.1	0.3	-0.4	-0.5
K	-0.1	0.6	0.1	0.2	-0.2	-0.6	-0.1	0.2	-0.1	0.6	-0.5	-0.3	-0.3	0.6	0.6	0.5	-0.6	0.2	0.2	-0.2
R	0.4	-0.1	-0.1	-0.1	-0.6	0.1	-0.2	0.4	-0.2	0.8	-0.1	0.1	-0.1	0.4	0.3	0.4	-0.5	-0.2	0.1	-0.3
H	-0.3	0	-0.2	-0.2	0.7	-0.3	0	-0.1	0.3	-0.1	-0.3	-0.1	0.3	-0.2	0	-0.4	0.8	0.1	-0.1	0.4
N	-0.3	-0.1	0.7	0.6	0.2	0.2	-0.1	0.2	0.1	-0.5	0.2	0	-0.2	0	-0.8	0.3	0.2	-0.1	-0.1	0
Q	0.3	0.2	0.6	0.3	-0.5	0.5	-0.1	-0.2	-0.4	0.1	-0.3	0.2	-0.3	-0.3	0.2	0.1	-0.1	0.3	0.2	-0.2
S	-0.3	-0.1	0.5	-0.1	0.3	-0.2	0	0.2	0.3	0.4	0	0.2	0.3	-0.2	-0.3	-0.3	-0.2	-0.2	-0.1	-0.1
T	-0.5	-0.1	-0.1	-0.4	-0.2	0.1	-0.1	0.5	0.3	0.8	0.1	-0.3	-0.1	0.2	0.6	-0.1	0.3	-0.3	-0.1	-0.1
G	0.3	-0.1	-0.2	0.6	0	-0.4	-0.1	0.1	-0.2	-0.2	0.2	0	0.6	-0.2	-0.4	-0.2	0.1	-0.1	-0.1	0.5
P	-0.2	0	-0.2	0.4	-0.1	0.8	0	-0.1	-0.1	-0.4	0.3	-0.5	0	-0.1	-0.2	-0.3	0.1	-0.1	0	0
C	0.8	0	-0.1	-0.3	0.3	-0.1	0	0	0	-0.1	-0.3	-0.2	0	0	-0.1	-0.1	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0234	1.1	-1.1	-0.7	-0.3	-0.8	-0.8	-1.2	-0.9	1.1	2.1	1.3	0.8	0.1	0.4	1.3	0.4	0.2	0.2	-0.8	-0.9
0237	0.6	-1	0.7	1.4	0.6	0.5	-1.2	-0.7	-0.4	0.9	0.5	0.5	-0.6	0	0.1	0.7	-0.4	-0.5	-1	-0.8

Select residue pair below:

i_j	Score	Prob
0237_0260	1.874	1.00
0237_0263	1.358	0.99
0233_0237	0.932	0.88
0234_0237	0.879	0.84
0237_0259	0.841	0.80
0237_0256	0.811	0.77

Local Interactions:

i_j	Score	Prob
0237_0238	0.634	0.49
0236_0237	0.543	0.34

See all coupling residues
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