OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [H:0228] and [S:0232]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	0.1	-0.2	-0.4	-0.4	0.1	0.2	0.5	0.1	-0.3	-0.1	0.9	-0.2	-0.6	-0.3	0.6	1.1	-0.6	-0.1	-0.3
F	-0.3	0	-0.1	-0.1	0.7	0	0	0	0	0	0	0	0	0	0	-0.5	-0.1	0	0	0
I	0	-0.1	-0.2	-0.4	-0.3	-0.1	-0.1	-0.1	0.1	0.3	0	-0.1	-0.1	0.2	0.3	0.3	-0.4	0.7	0	-0.1
L	0.1	-0.1	-0.3	-0.4	-0.5	-0.1	-0.1	0.2	-0.2	-0.3	0.4	0.7	0.4	-0.2	0.3	0.7	-0.2	0	0	-0.1
V	-0.2	-0.1	-0.4	-0.1	-0.6	-0.1	-0.1	0.5	1	0.7	0	0.2	-0.1	-0.3	-0.1	-0.3	0.1	0.1	0	-0.1
M	0.1	-0.1	-0.2	-0.2	-0.3	-0.1	0	-0.1	0.2	0.4	0	-0.1	0	-0.1	-0.1	-0.9	-0.2	-0.1	0	1.6
W	-0.3	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0.2	0	0	0	0
Y	0	-0.1	0.2	-0.2	-0.3	0	0	0	-0.1	-0.1	0	-0.1	0	1.6	0	-0.5	-0.6	-0.1	0	0
D	0.1	0.2	-0.2	-0.1	0	-0.3	0.2	0.1	-0.5	0.1	-0.1	-0.3	0.6	-0.6	-0.2	0.9	1	-0.5	-0.1	0
E	0.1	0.2	0.3	0.1	0.1	0.1	0.1	-0.3	-0.1	-0.6	-0.1	0.3	-0.1	0.3	-0.3	0.4	0.8	-0.1	-0.1	-0.5
K	-0.3	-0.2	0.5	0.7	0.1	0.1	-0.1	0.4	-0.3	-0.1	-0.1	-0.3	0.1	-0.1	0.1	-0.2	-0.1	0	0.1	-0.1
R	0.4	-0.4	0.1	0.2	0.9	0.1	-0.1	0.1	0.1	-0.3	-0.1	-0.3	0.2	-0.5	-0.1	0.3	-0.2	-0.2	0	0.2
H	0.9	-0.1	0.2	0.5	-0.1	0.3	-0.1	-0.1	-0.2	0.3	0	-0.2	-0.1	-0.4	-0.1	-0.1	-0.5	0.2	-0.1	-0.1
N	0.6	-0.3	0.7	0.8	0.7	0.7	-0.2	-0.2	-0.3	-0.5	-0.1	0.3	-0.2	-0.2	-0.2	-0.3	-0.1	-0.2	-0.1	-0.3
Q	0.1	0.6	0.3	0.6	0.1	-0.3	-0.2	-0.3	0.7	-0.2	-0.1	-0.3	-0.1	-0.1	-0.1	-0.1	0	0.1	-0.1	-0.2
S	0	0	0.2	0.3	0.7	-0.2	-0.2	-0.3	-0.4	-0.5	0.3	-0.3	-0.1	-0.3	0.3	0	-0.5	0.9	0.3	0.1
T	-0.7	0.8	-0.5	-0.3	-0.4	-0.2	-0.1	-0.2	0	0.8	-0.1	-0.2	-0.1	0.4	-0.2	0.4	0.5	-0.3	0	0.6
G	0.7	-0.1	-0.1	-0.4	0.4	-0.2	0.6	0	0.2	0.3	-0.3	-0.2	-0.5	1.3	0.8	-0.4	-0.7	0.4	-0.3	-0.7
P	-0.2	0	-0.2	-0.2	0.1	0.3	0	-0.1	-0.1	0.2	0	-0.1	0	-0.2	-0.1	0.3	0.2	-0.1	0	-0.1
C	-0.5	-0.1	-0.1	0	-0.2	0	0	0	-0.1	-0.1	0	-0.1	0	-0.1	0	0	0.7	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0228	0.9	-1.3	0	-0.1	-0.2	-0.4	-1.2	-0.8	0.5	1	0.5	0.6	0.1	0.9	0.7	0.5	0.3	1.3	-0.6	-1.2
0232	2	-0.1	0.1	0.8	1.2	-0.5	-0.7	-0.1	0	-0.1	-1	-0.5	-0.6	-0.1	-0.4	1.3	1.6	-0.1	-1.1	-0.5

Select residue pair below:

i_j	Score	Prob
0188_0232	1.274	0.99
0185_0232	1.213	0.98
0232_0235	0.737	0.67
0228_0232	0.727	0.65
0195_0232	0.620	0.47

Local Interactions:

i_j

Score

Prob

See all coupling residues
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