OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [T:0195] and [S:0232]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.7	0	-0.4	-0.4	-0.6	-0.1	-0.3	-0.3	0.8	-0.5	0.3	0.1	-0.2	0.1	0	1.1	-0.2	-0.1	0.2	-0.3
F	-0.4	1	0.6	-0.1	0.1	0.6	-0.4	-0.1	-0.3	-0.4	-0.1	-0.4	-0.1	0	1.3	-0.3	-0.5	0.1	0.2	-0.3
I	0.1	-0.1	0.2	0.2	0.3	0.4	-0.4	-0.4	-0.2	0.1	0.2	0.2	-0.2	0.6	-0.5	-0.6	0.8	0.2	-0.1	-0.3
L	0	-0.3	1	0.3	0.8	0	-0.3	-0.3	-0.1	-0.1	-0.1	-0.3	0.2	-0.3	-0.3	-0.6	0.4	0.2	-0.1	0.2
V	0.1	-0.4	0.1	0.5	0.3	-0.4	-0.5	-0.3	0.2	0.4	-0.2	0.3	-0.1	0.4	-0.4	0.3	0.2	0	-0.3	0.5
M	0.4	-0.3	0.6	-0.5	0.7	0.1	-0.2	-0.4	-0.1	0.2	-0.1	-0.3	0.2	0.1	0.1	-0.2	-0.6	-0.1	-0.1	0.6
W	1.5	-0.1	-0.2	-0.2	-0.4	-0.1	1	-0.2	-0.1	-0.2	0	-0.1	0	-0.3	0.3	-0.2	-0.3	-0.2	0	-0.1
Y	0	-0.1	-0.3	0.8	0.4	0.2	-0.1	-0.2	-0.1	-0.2	0	0.2	-0.1	0.6	-0.2	-0.5	0	0	0	-0.1
D	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0
E	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0
K	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0
R	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0
H	-0.2	0	0	0	-0.1	0	0	0.4	0	0	0	0	0	0	0	-0.2	-0.2	0	0	0
N	-0.1	0	-0.1	-0.1	-0.1	0	0	1	0	0	0	-0.1	0	-0.1	0	0	-0.5	-0.1	0	0
Q	0	-0.1	-0.1	-0.1	-0.2	0	0	0	-0.1	-0.1	0	-0.1	0	0.3	0	-0.5	0.8	-0.1	0	0
S	0	-0.2	-0.4	-0.7	0	-0.4	0.2	0.3	0	1.1	-0.1	-0.2	-0.2	-0.4	-0.1	1.1	0.3	0.5	-0.1	-0.2
T	-0.3	-0.3	0.1	0.8	0.6	-0.2	1	-0.2	0.5	-0.1	-0.1	-0.2	-0.2	-0.5	0.1	0.3	-0.1	0	-0.1	-0.3
G	-0.1	-0.1	-0.3	-0.3	-0.2	-0.2	-0.1	-0.1	-0.2	0.2	-0.1	0.7	0.4	-0.3	-0.1	0.5	0.9	-0.2	-0.1	-0.1
P	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0
C	0	0.9	-0.6	0.3	-0.7	-0.3	-0.1	0.8	-0.3	-0.3	-0.1	-0.2	-0.1	-0.2	-0.2	1	0.1	-0.2	-0.1	0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0195	-0.1	0.9	1.3	0.9	1.4	0.3	0.2	0.6	-1.1	-1.1	-1.1	-1.1	-0.9	-0.3	-0.7	1.2	1.3	0.1	-1.1	0.1
0232	2	-0.1	0.1	0.8	1.2	-0.5	-0.7	-0.1	0	-0.1	-1	-0.5	-0.6	-0.1	-0.4	1.3	1.6	-0.1	-1.1	-0.5

Select residue pair below:

i_j	Score	Prob
0188_0232	1.274	0.99
0185_0232	1.213	0.98
0232_0235	0.737	0.67
0228_0232	0.727	0.65
0195_0232	0.620	0.47

Local Interactions:

i_j

Score

Prob

See all coupling residues
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