OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [I:0198] and [D:0199]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0	-0.1	-0.2	0	-0.1	0	0	0.1	-0.1	-0.5	0.4	-0.2	-0.4	0.2	-0.3	0.1	-0.2	0.8	0.1
F	0.1	-0.1	0.1	0.1	0.5	0	-0.1	-0.4	-0.2	0.1	0.7	-0.2	-0.3	0.1	-0.2	0.1	0.7	-0.2	0.3	-0.2
I	-0.3	-0.1	-0.4	-0.4	0.3	-0.1	0	-0.1	0.5	-0.2	0.3	-0.4	-0.4	0.7	0.1	-0.2	-0.3	0	1.1	-0.1
L	-0.3	-0.1	0	-0.2	-0.5	-0.2	-0.1	-0.1	0.5	0.2	-0.3	-1	-0.1	0.1	-0.4	0.6	0.2	0.9	1.6	-0.2
V	-0.7	-0.1	-0.3	0.1	0.5	0.2	-0.1	0.2	0.2	0	0.5	-0.3	-0.4	0.4	-0.3	-0.6	0.2	-0.2	1	-0.1
M	-0.1	0	-0.1	-0.1	-0.2	0	0	0	-0.2	-0.5	-0.3	-0.3	-0.1	-0.1	0.2	-0.1	-0.1	-0.1	1.5	0
W	-0.3	0	0.3	-0.1	-0.2	-0.1	0	0	-0.3	0.2	0	0.3	0.3	-0.2	0.7	0	-0.2	-0.2	-0.8	0
Y	0.1	-0.1	-0.1	0.8	0.1	-0.1	0	-0.1	0.2	0.1	0	0.6	-0.3	-0.4	-0.4	0	-0.2	0.4	-0.4	0
D	0.1	-0.3	0.5	-0.1	0.2	-0.3	-0.2	0.4	-0.5	0.1	-0.1	0.7	1.3	-0.5	0	0.2	0.6	-0.3	-0.9	0
E	0.2	-0.1	-0.3	-0.1	-0.3	0.2	0	-0.1	-0.5	0.7	0	0.1	-0.1	-0.4	0.6	0.1	0.1	0.3	0	0.3
K	-0.1	0	0	0	0	0	0	0	0.3	-0.1	-0.1	0	0	0	0	0	0	0	-0.2	0
R	0.1	0.4	0	-0.1	-0.1	0	0	0	0	0.3	-0.2	-0.2	-0.1	0	0	-0.1	0	-0.1	-0.3	0
H	0.4	0	0.8	-0.4	0.2	0.2	0	0	-0.3	-0.1	0	0.4	0.3	-0.3	-0.3	0	0	0.1	-0.7	-0.1
N	0.3	0	-0.1	0	-0.2	0	0	0	0	-0.1	0.6	0.3	-0.2	0.2	0.2	0.1	-0.1	0.1	-0.9	0
Q	-0.1	0	-0.1	-0.1	-0.1	0	0	0	-0.3	0.1	-0.1	0.3	0.2	-0.1	-0.1	-0.1	-0.1	-0.1	0.4	0
S	-0.3	0	0.2	0.8	0.4	-0.1	0	-0.1	0	0.1	0	0.5	0.1	0	0.1	0.1	-0.3	-0.2	-0.7	0
T	-0.2	0	-0.1	-0.1	-0.1	0	0	0	0.1	-0.4	-0.2	-0.2	-0.1	0.9	-0.1	0.7	-0.1	-0.1	-0.2	0
G	-0.1	0	0	0	-0.1	0	0	0	0.9	-0.2	-0.2	-0.2	-0.1	0.2	-0.1	-0.1	0	-0.1	-0.3	0
P	-0.1	0	0	0	0	0	0	0	-0.1	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0
C	1.4	0	-0.2	-0.2	-0.3	-0.1	0	0	0.1	0.4	-0.1	-0.2	-0.2	-0.1	0.1	-0.2	-0.2	-0.2	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0198	0.3	1	0.8	0	0.9	-0.7	-0.2	0.7	1	0.8	-1	-0.7	0.2	0.1	-0.5	0.3	0.1	-0.8	-1	-0.5
0199	0.6	-1.3	-0.4	0.1	0.1	-0.9	-1.4	-1.1	1.1	0.9	0.4	0.7	-0.4	0.3	0.5	0.3	0.3	-0.1	2.1	-1.1

Select residue pair below:

i_j	Score	Prob
0181_0199	3.642	1.00
0179_0199	1.343	0.99

Local Interactions:

i_j	Score	Prob
0197_0199	1.249	0.99
0198_0199	1.205	0.98
0199_0200	0.845	0.81
0199_0201	0.615	0.46

See all coupling residues
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