May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

India-Argentina Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [K:0181] and [D:0199]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0 -0.2 0.1 -0.1 -0.1 0 -0.1 0 0.2 -0.2 0.5 -0.3 -0.3 0.7 -0.1 0.9 0 -0.6 -0.1
F 0 0 -0.1 -0.1 -0.2 0 0 0 -0.3 -0.5 -0.4 0.5 -0.1 -0.2 -0.2 0.2 0.6 -0.1 0.4 0.2
I -0.2 0 0.1 -0.3 0 0.3 0 -0.1 -0.2 0.2 0.4 -0.5 0.1 0.1 0.2 -0.2 -0.2 -0.2 0.6 -0.1
L 0.3 -0.1 0.1 0.3 0.2 -0.1 0 -0.1 -0.7 0.2 -0.4 0.5 0.1 -0.2 0.4 -0.2 -0.2 -0.3 0.3 -0.1
V 0 -0.1 -0.3 0.1 0.1 -0.1 0 -0.1 0.3 -0.7 0.2 0.3 -0.5 -0.1 -0.3 -0.1 0.3 -0.3 0.5 0.3
M -0.3 0 -0.1 0.3 0.5 0 0 0 -0.2 -0.2 -0.1 -0.1 0.1 -0.1 -0.2 0.3 -0.2 0.1 0.1 0
W -0.2 0 0 -0.1 -0.1 0 0 0 -0.2 -0.4 -0.3 0.3 -0.1 1.8 -0.1 -0.2 -0.1 -0.1 -0.5 0
Y -0.3 0 0.3 -0.1 -0.2 0 0 -0.1 -0.1 -0.6 0.7 -0.1 -0.1 0 0.2 -0.2 0.2 -0.1 0.4 0
D 0.3 0 -0.2 -0.3 -0.1 -0.1 0 -0.1 0.1 -0.8 0.4 1.7 0 0.1 -0.2 -0.3 -0.4 -0.1 0.2 -0.1
E 0.2 -0.2 -0.3 -0.7 -0.1 0.5 -0.1 -0.1 0.1 -1.2 0.9 1 0.8 -0.2 0 -0.4 -0.5 0.5 0.8 0
K -0.4 -0.1 1.2 -0.5 0.1 -0.2 -0.1 -0.2 0.3 0.7 -0.1 -0.8 -0.3 0.1 0 0.6 -0.1 -0.1 0 -0.1
R 0.1 -0.1 -0.1 0.4 0.8 -0.3 -0.1 -0.3 1 1.9 -0.6 -1.2 -0.7 -0.4 -0.1 0 0.7 0.3 0.2 -0.2
H -0.5 0 -0.3 0.4 0.3 -0.1 0 -0.1 1.1 0 0.2 -0.3 -0.3 -0.1 -0.1 0.1 0.2 -0.1 0.2 -0.1
N -0.4 0 -0.1 -0.1 0.1 0 0 0 -0.2 0.6 0 -0.3 -0.2 0.2 0.3 0.2 -0.2 -0.1 0.3 0
Q 0.6 -0.1 0.2 0.4 -0.4 -0.2 -0.1 0.1 -0.3 0.1 0.3 -0.7 -0.5 -0.2 0 0.1 0.4 0.4 0.7 -0.2
S 0.4 0 -0.1 -0.2 -0.2 -0.1 0 -0.1 -0.3 1.3 0.1 0.2 0.9 -0.2 -0.3 -0.1 -0.4 -0.1 -0.4 0
T 0.3 0.3 -0.5 -0.7 -0.7 -0.2 -0.1 0.5 0.5 0.5 -0.3 -0.3 0.8 0.3 0.3 0.5 -0.6 0.1 -0.4 -0.2
G 0.4 0 0.4 -0.1 -0.1 0 0 0.2 0.1 -0.3 -0.2 -0.2 0.4 -0.1 -0.1 -0.1 -0.1 0.2 -0.6 0
P -0.1 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.3 0
C -0.1 0 -0.1 0.3 -0.1 0.5 0 0 -0.1 -0.2 -0.1 -0.2 -0.1 -0.1 -0.1 0.3 -0.1 0 -0.2 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0181 0.4 -0.9 0.1 0.4 0.8 -0.8 -1.1 -0.6 0.1 1.6 0.9 1.2 0.4 -0.5 1 0 1.5 -0.7 -1.6 -1.1
0199 0.6 -1.3 -0.4 0.1 0.1 -0.9 -1.4 -1.1 1.1 0.9 0.4 0.7 -0.4 0.3 0.5 0.3 0.3 -0.1 2.1 -1.1
Select residue pair below:
i_j Score Prob
0181_0199 3.642 1.00
0179_0199 1.343 0.99
Local Interactions:
i_j Score Prob
0197_0199 1.249 0.99
0198_0199 1.205 0.98
0199_0200 0.845 0.81
0199_0201 0.615 0.46
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...

Page generated in 0.0236 seconds.