OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [H:0133] and [T:0139]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	0.6	0.3	-0.2	0.2	0	-0.1	0.5	-0.1	-0.1	-0.1	1.4	-0.1	-0.1	-0.1	-0.6	-0.2	-0.2	0.1	-0.3
F	0.3	0	-0.1	-0.4	0.1	-0.1	0	-0.1	0	0	0.5	-0.1	0	0	0	-0.1	-0.2	0	-0.1	0
I	-0.1	0.2	0.1	-0.1	0.6	-0.1	0	-0.1	0	0	0	-0.1	0	0	0	-0.2	-0.2	0	0	0
L	0.3	0.2	-0.5	0.4	0.4	0	-0.1	0.4	-0.1	-0.1	-0.1	-0.5	-0.1	-0.1	-0.1	-0.9	-0.9	0.4	1.6	-0.1
V	0.3	1.1	0.2	0.1	0.2	-0.1	-0.1	-0.3	0	0	0	-0.1	0	0	0	-0.6	-0.1	-0.1	-0.1	-0.1
M	0.7	-0.1	-0.4	0.8	0	-0.1	0	-0.2	0	0	0	-0.2	0	0	0.4	-0.2	-0.4	-0.1	-0.1	-0.1
W	0	-0.1	-0.4	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
Y	-0.1	0.6	0.3	-0.4	-0.1	-0.1	0	-0.1	0	0	0	-0.1	0	0	0	-0.1	-0.3	0	0	0
D	0.1	-0.4	-0.3	-0.4	-0.2	0.3	-0.1	-0.5	0	0	-0.1	0.7	0.5	-0.1	-0.1	0.9	0	-0.3	-0.2	0.2
E	-0.6	0.5	0.1	-0.4	-0.1	-0.3	-0.1	0	0	0	-0.1	1	-0.1	0.4	-0.1	0.2	0.1	0.4	-0.2	0.1
K	-0.2	1.1	0.6	-0.1	0.3	-0.1	0.3	-0.1	-0.1	-0.1	-0.1	-0.6	-0.1	-0.1	-0.1	0.2	0.1	-0.2	-0.2	-0.2
R	-0.2	0.1	0.5	-0.2	0.6	-0.1	-0.1	0.3	0	0	-0.1	-0.2	-0.1	-0.1	-0.1	-0.6	0.8	-0.2	-0.2	-0.2
H	-0.4	-0.6	0.3	-0.8	-0.8	0.2	-0.1	-0.2	0	0	0.4	-0.2	0	0	0	2	0.6	-0.1	-0.1	-0.1
N	0.5	-0.2	-0.2	0.1	-0.5	-0.2	-0.1	-0.2	0	0	-0.1	-0.1	0	0	0	0	1.6	-0.1	-0.1	-0.1
Q	-0.3	-0.1	-0.1	0.4	0.6	-0.3	0.3	-0.6	-0.1	-0.1	-0.1	-0.6	-0.1	-0.1	-0.1	0	1.2	-0.2	-0.3	1.2
S	0	-0.6	0.5	-0.7	0.4	-0.2	0	0.1	0	0	0	0.3	0	0	0	0	-0.2	0.3	-0.1	0
T	0.2	0	-0.3	0.4	0	-0.2	0	0.3	0	0	0	-0.3	0	0	0	0.1	0.4	-0.1	-0.1	-0.1
G	0.1	-0.7	0.9	0.3	-0.5	-0.2	-0.1	0.1	0	0	0	0.1	0	0	0	0.2	-0.2	-0.1	-0.1	0.3
P	-0.3	-0.7	0	0	-0.1	0.8	-0.1	0.9	-0.1	-0.1	-0.1	0.2	-0.1	-0.1	-0.1	-0.4	-0.2	0.5	-0.2	-0.2
C	-0.2	-0.4	-0.6	1.5	-0.7	0.3	0	0.1	0	0	0	-0.1	0	0	0	0.3	-0.3	0	-0.1	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0133	1.2	-0.8	-0.8	0.3	0.2	-0.4	-1.7	-1.1	0.9	0.8	0.1	0	-0.2	0.1	1.1	0.2	0.1	0.4	0.7	-0.7
0139	0.4	-0.2	1.8	1.6	1.8	0.2	-0.8	0	-1.1	-1.1	-0.8	0.6	-0.9	-1	-0.9	0	2	-0.7	-1.1	-0.3

Select residue pair below:

i_j	Score	Prob
0129_0139	0.941	0.89
0118_0139	0.800	0.75
0116_0139	0.777	0.72
0133_0139	0.617	0.47
0139_0165	0.604	0.44

Local Interactions:

i_j

Score

Prob

See all coupling residues
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