OPENSEQ.org -1515595952- GREMLIN Submission

May 4, 2021 - We are working on upgrading the webserver, some pages may not work.

India-Argentina

Return to Main Page

Instructions

Use the menu to the right to browse the coupling matrix.

Coupling matrix for [V:0118] and [T:0139]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	0.6	-0.9	0.7	-0.7	0	-0.1	-0.5	-0.1	-0.1	-0.1	1.2	-0.1	-0.1	-0.1	-0.2	0.3	-0.2	-0.4	0.7
F	0.1	0.1	-0.1	-0.2	0.6	0.1	-0.1	-0.1	0	0	-0.1	-0.3	-0.1	-0.1	-0.1	-0.5	0.4	0.1	1	-0.1
I	0.5	-0.4	0.6	0.3	0.7	0	-0.1	-0.4	0	0	-0.1	-0.6	-0.1	-0.1	-0.1	0.1	0.6	-0.2	-0.1	-0.2
L	0.7	-0.5	0.7	0	1	-0.1	-0.2	-0.1	-0.1	-0.1	0.1	0.5	-0.1	-0.1	-0.1	1.1	-0.1	-0.3	-0.6	-0.4
V	0.1	0.1	0.4	1.2	0.9	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.6	-0.1	-0.1	-0.1	0	0.5	-0.2	-0.5	-0.3
M	-0.2	0.1	0.5	-0.1	-0.4	0.2	0	-0.2	0	0	0	0.5	0	0	0	-0.2	-0.3	0.4	-0.1	-0.1
W	-0.1	-0.1	-0.3	-0.1	-0.3	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	1.1	0
Y	0.1	0.1	1.1	-0.5	0.8	-0.1	-0.1	0.2	0	0	-0.1	0	-0.1	0	0	-0.2	-0.4	-0.1	-0.2	-0.2
D	-0.1	0	0	-0.4	0.1	-0.1	0	-0.1	0	0	0	-0.1	0	0	0	0	0.8	0	0	0
E	0	-0.1	0.2	-0.1	-0.2	0	0	-0.1	0	0	0	0	0	0	0	0	-0.1	0	0	0
K	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
R	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
H	-0.1	-0.3	-0.3	0	-0.5	-0.1	0	-0.1	0	0	0	1.2	0	0	0	-0.1	-0.1	0	0	0
N	0.2	0.9	0.1	-0.4	0.8	-0.1	-0.2	-0.2	-0.1	-0.1	-0.2	-1.4	0.1	0.1	0.1	-0.4	0.2	0.5	-0.1	-0.3
Q	0	-0.2	-0.2	-0.2	0.2	0	0	0	0	0	0	0.4	0	0	0	0	-0.1	0	0	0
S	0.1	-0.1	-0.5	-0.2	-0.7	-0.2	0.8	0.1	0	0	0	0.4	0.2	0	0	-0.3	0.9	-0.1	-0.1	-0.1
T	-0.3	0.4	0.3	0.1	-0.7	0.5	-0.1	1.7	0	0	0	-0.3	-0.1	0	0	-0.3	-0.2	-0.1	-0.1	-0.1
G	0	-0.1	-0.2	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0.2	0	0	0	0
P	-0.3	-0.2	-0.8	-0.2	-0.3	-0.1	-0.1	-0.1	0	0	-0.1	-0.2	0	0	0	1.7	-0.3	-0.1	-0.1	1.3
C	-0.4	-0.4	0.8	1.2	0.3	0.2	-0.1	-0.2	0	0	0.4	-0.2	0	0	0	-0.6	-0.8	-0.1	-0.1	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0118	1	0.9	1.4	1.7	1.1	0.1	-0.6	0.5	-0.3	-1	-1.1	-1.1	-0.3	-0.2	-0.6	-0.1	0.8	-0.9	0	-0.4
0139	0.4	-0.2	1.8	1.6	1.8	0.2	-0.8	0	-1.1	-1.1	-0.8	0.6	-0.9	-1	-0.9	0	2	-0.7	-1.1	-0.3

Select residue pair below:

i_j	Score	Prob
0129_0139	0.941	0.89
0118_0139	0.800	0.75
0116_0139	0.777	0.72
0133_0139	0.617	0.47
0139_0165	0.604	0.44

Local Interactions:

i_j

Score

Prob

See all coupling residues
Download raw data

Page generated in 0.0148 seconds.